Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2057 ATGGCCAAGTCTAAGTTCCTTGCTGTTTTGATCTTGGCCCTCATTGCCATTTCCATGCTTCAAACTGTGGTTATGGCATCTCATGGGCATGGAGGACACCATTACAATGACCAGAGGAAATATGGACCTGGCAGTCTCAAGAGCTACCAATGCCCATCAAAATGTTCAACAAGGTGCAGTAGGACCCAATACCACAAGCCGTGCATGTTTTTTTGTCAGAAGTGCTGTAACAAGTGCCTCTGTGTTCCCCCGGGGTATTATGGGAACAAAGCTGTCTGCCCCTGCTACAACAACTGGAAGACCAAGGAAGGAGGACCAAAATGCCCTTGA 330 0.4788 MAKSKFLAVLILALIAISMLQTVVMASHGHGGHHYNDQRKYGPGSLKSYQCPSKCSTRCSRTQYHKPCMFFCQKCCNKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2057 109 Pfam Gibberellin regulated protein 50 109 IPR003854 -
Ahy10g2057 109 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 109 - -
Ahy10g2057 109 PANTHER GIBBERELLIN-REGULATED FAMILY PROTEIN 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2057 Ahy-Chr10 108493844 108496853 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2057 - - gmx:100305480 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2542 20 133819899 133822944 Ahy10g2057 10 108493844 108496853 hybridization
Ahy10g2057 10 108493844 108496853 Ahy14g2882 14 137482644 137484394 PCT
Ahy10g2057 10 108493844 108496853 Ahy4g2532 4 123175706 123177441 PCT
Ahy14g2882 14 137482644 137484394 Ahy10g2057 10 108493844 108496853 PCT
Ahy4g2532 4 123175706 123177441 Ahy10g2057 10 108493844 108496853 PCT