Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2512 ATGGTTAAGGGTCCAGGTCTCTACTCTGACATTGGAAAGAAAGCCAGAGATCTGCTGTTCAAGGATTACCACACTGATCAGAAGTTCACCGTCACCACCTACTCACCCACTGGAGTTGCTATAACATCAACAGGGATCAAGAGAGATGAACTATTTATGGCTGAAGTTAACACTCAGTTGAAGAACAAGAATGTCACCACTGACATCAAAGTTGACACCGATTCTAATCTCTTCACAACCATCACTGTTAATGAGCCTGCTCCTGGTCTCAAAACCATCTTTAACTTCAGAATTCCTGATCAAAGGTCTGGAAAGGTGGAAGTTCAGTATGTGCATGGCTATTCTGGAATAAGCACCAGTGTTGGGCTCACTGCAAATCCAATTGTTAACTTCTCTGGTGTTTTAGGGACTGACGTACTTGCAATTGGTTCTGAGCTCTCTTACGACACCAAAATTGGGGAGTTCACAAAATACAATGCTGGAGTGAACTTCACCAAAGCTGACTTGGTTGCCTCTTTGACTGTGACTGACAAAGGCGATACCCTGAATGCGTCATACTACCATTTAGTCAACCCCTTGAACAACACTGCGTTTGGTGCCGAGGTGACTCACAGTTTCTCAACCAATAAGAACACCCTCACACTTGGCAGCCAGCATGCACTAGACCCCTTGACCACAGTGAAGGCTCGGATCAACCACTCCGGCAAGGCACATGCCCTTATCCAGCATGAGTGGCGTCCCAAATCATTCTTCACCATTTCCGGGGAGGTCGACACCAAGTCTTTCGAGCAGAGTGCCAAGATTGGATTGGGTTTGGCTCTCAAACCCTAA 831 0.4633 MVKGPGLYSDIGKKARDLLFKDYHTDQKFTVTTYSPTGVAITSTGIKRDELFMAEVNTQLKNKNVTTDIKVDTDSNLFTTITVNEPAPGLKTIFNFRIPDQRSGKVEVQYVHGYSGISTSVGLTANPIVNFSGVLGTDVLAIGSELSYDTKIGEFTKYNAGVNFTKADLVASLTVTDKGDTLNASYYHLVNPLNNTAFGAEVTHSFSTNKNTLTLGSQHALDPLTTVKARINHSGKAHALIQHEWRPKSFFTISGEVDTKSFEQSAKIGLGLALKP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2512 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Ahy20g2512 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Ahy20g2512 276 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 276 - -
Ahy20g2512 276 Gene3D Porin 1 275 IPR023614 -
Ahy20g2512 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2512 Ahy-Chr20 132670774 132675009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2512 K15040 - gmx:100170756 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1859 11 121017714 121019749 Ahy20g2512 20 132670774 132675009 ECH
Ahy13g3788 13 137041051 137043722 Ahy20g2512 20 132670774 132675009 ECH
Ahy20g2512 20 132670774 132675009 Ahy20g2512 20 132670774 132675009 ECH