Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1859 ATGAGCAAGTGTCCGGGGATATATTTTGATATTGGGAAGAAGGCCAGAGGTGTTCTTCAAAAGGACTATGCTCATCAATCACCAATTCACTTTCACTACCAGTTTATGGACTGGAATGTAGACCTCTCTTGTCAAGTAGAAGAAATTGTACCTGGATTCAGGAGCCTTTTCAACTGTACCATACCTGATTCTGGAAAGGTGGAACTACAATACTTGAACAACTTCAGTGGAGTTACTGGATGTATTGGATTAGTAGGAAACTCAAATGGAGGATATGACCCTGCTGTAAACATCTCAGGCCTTGTAGGAACAAGCACTGTCTCCCTTGGAGCCAATGTCGCTTTCGACATAGCATCAAGAACAATCAACAAATTTAATGCAGGCTTAAACTTCAACACTGCCTTCCTTATTGCTTCCCTAACCTTAAATGACAAATTTGACAAGGTGAAAGCCTCATGTTATCATGAAGTGAATCCTCTGACCAAGACAGCTATTGCAGCAGAGCTGAGGCATAGCTTTTCGGAAAGCGAGACTGGTGTTACCATTGGTGCTCAACATGCTTTCTTACCGGACACATTGGTGAAAGCTCGGCTGGATAGTACTGGCAAGGTTGGCGCGCTCATTCAACAAGGTTTCTTGCAGAGATTTTTTGTAACTATGGCTGGGGAAATGGATTTTACATCCATAAATGATAAGGCTCCTAAAATTGGAGTCTCTCTGGCTCTAACACCTTAA 735 0.4245 MSKCPGIYFDIGKKARGVLQKDYAHQSPIHFHYQFMDWNVDLSCQVEEIVPGFRSLFNCTIPDSGKVELQYLNNFSGVTGCIGLVGNSNGGYDPAVNISGLVGTSTVSLGANVAFDIASRTINKFNAGLNFNTAFLIASLTLNDKFDKVKASCYHEVNPLTKTAIAAELRHSFSESETGVTIGAQHAFLPDTLVKARLDSTGKVGALIQQGFLQRFFVTMAGEMDFTSINDKAPKIGVSLALTP* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1859 244 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 243 IPR001925 GO:0005741|GO:0008308|GO:0098656
Ahy11g1859 244 CDD Porin3_VDAC 5 242 IPR001925 GO:0005741|GO:0008308|GO:0098656
Ahy11g1859 244 Pfam Eukaryotic porin 37 233 IPR027246 GO:0005741|GO:0055085
Ahy11g1859 244 Gene3D Porin 3 243 IPR023614 -
Ahy11g1859 244 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1859 Ahy-Chr11 121017714 121019749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1859 K15040 - gmx:100787061 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1859 11 121017714 121019749 Ahy20g2512 20 132670774 132675009 ECH
Ahy13g3788 13 137041051 137043722 Ahy11g1859 11 121017714 121019749 ECH
Ahy11g1859 11 121017714 121019749 Ahy11g1859 11 121017714 121019749 ECH
Ahy11g1859 11 121017714 121019749 Ahy1g2995 1 111762266 111764326 hybridization