Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2436 ATGACCTCTTCTATGGCGGTTCAGAGCTCCAATCCCCGCGAAGCAAAACCTTCAAAGAACGATCTCAGTTCTCACTTCTTCGTATGGAGAGAGTTTGTGTGGGGAGCTGTTGCTGGGGCTTTTGGGGAAGGAATGATGCATCCAGTTGATACCATTAAAACCCGAATACAAAGCCAAGCTATTCTTCCTGGAGTTCAGAATCAGAAGAGCATATTGCAGATGGTGCGACTTGTCTGGCATGAGGATGGAATAAGAGGCTTTTACAGGGGTGTAGCACCTGGCGTTATTGGGTCTCTTGCAACTGGTGCAACATATTTTGGTGTTATAGAGTCCACTAAAAAGTGGATTGAGGATTCACATCCTAGGCTTAAGGGCCACTGGGCACATTTCATTGCTGGAGCTGTTGGAGATACTCTTGGTTCTGTTGTATATGTTCCATGCGAAGTGATGAAGCAACGCATGCAAGTGCAGGGGACATATTCATCTTGGAGTTCTATCGCCATGAATGATGGCATTGCCATGAATTCTAGCCAAAAACTGTATGGCTATTATACAGGGATGTTCCATGCGGGCTGCTCAATATGGAGAACACAGGGTGTAAAGGGTTTATATGCAGGATATTTCTCTACTCTTGCAAGGGATGTTCCATTTGCTGGCCTAATGGTCATGTTTTATGAAGGTTTGAAAGATGTTACTGAATATGGGAAGCAAAGATTGACATCCAACTCAAATTGGCATGTCAATAACTCATTTGAGGGACTTGTTTTAGGAGGATTAGCTGGTGGTCTTAGTGCATATCTCACCACCCCGTTGGATGTAATCAAAACAAGATTGCAAGTGCAGGGTTCAACTTTAAGGTATAACGGTTGGTTGGATGCAATTTGCAATATATGGGAAAAGGAAGGCATGAAGGGGATGTTCAGGGGTAGCATCCCAAGGATTTCATGGTACATTCCGGCTTCTGCACTTACATTTATGGCTGTGGAATTTCTCAGAGACCATTATAATGAAGGAGCCACTGACAAGAAGGTGCAAGAAGTTGCAAGACTATCAGTCGACAAGAAGAAACCAATGCAAGAGGTTTCTTAG 1089 0.4389 MTSSMAVQSSNPREAKPSKNDLSSHFFVWREFVWGAVAGAFGEGMMHPVDTIKTRIQSQAILPGVQNQKSILQMVRLVWHEDGIRGFYRGVAPGVIGSLATGATYFGVIESTKKWIEDSHPRLKGHWAHFIAGAVGDTLGSVVYVPCEVMKQRMQVQGTYSSWSSIAMNDGIAMNSSQKLYGYYTGMFHAGCSIWRTQGVKGLYAGYFSTLARDVPFAGLMVMFYEGLKDVTEYGKQRLTSNSNWHVNNSFEGLVLGGLAGGLSAYLTTPLDVIKTRLQVQGSTLRYNGWLDAICNIWEKEGMKGMFRGSIPRISWYIPASALTFMAVEFLRDHYNEGATDKKVQEVARLSVDKKKPMQEVS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2436 362 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 5 358 - -
Ahy20g2436 362 Pfam Mitochondrial carrier protein 125 231 IPR018108 -
Ahy20g2436 362 Pfam Mitochondrial carrier protein 250 337 IPR018108 -
Ahy20g2436 362 Pfam Mitochondrial carrier protein 27 118 IPR018108 -
Ahy20g2436 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 334 IPR018108 -
Ahy20g2436 362 SUPERFAMILY Mitochondrial carrier 27 331 IPR023395 -
Ahy20g2436 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 115 IPR018108 -
Ahy20g2436 362 Gene3D Mitochondrial carrier domain 178 353 IPR023395 -
Ahy20g2436 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 231 IPR018108 -
Ahy20g2436 362 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 5 358 - -
Ahy20g2436 362 Gene3D Mitochondrial carrier domain 5 177 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2436 Ahy-Chr20 130094853 130099630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2436 28 339 EF-hand Containing Proteins AT2G35800 28.481 1.57e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2436 - - ahf:112716291 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2436 20 130094853 130099630 Ahy20g2436 20 130094853 130099630 ECH
Ahy20g2436 20 130094853 130099630 Ahy10g1955 10 105639156 105643927 hybridization