Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1955 ATGACCTCTTCTATGGCGGTTCAGAGCTCCAATCCCCGCGAAGCAAAACCTTCAAAGAACGATCTCAGTTCTCACTTCTTCGTATGGAGAGAGTTTGTGTGGGGAGCTGTTGCTGGGGCTTTTGGGGAAGGAATGATGCATCCAGTTGATACCATTAAAACCCGAATACAAAGCCAAGCTATTCTTGCTGGAGTTCAGAATCAGAAGAGCATATTGCAGATGGTGCGACTTGTCTGGCATGAGGATGGAATAAGAGGCTTTTACAGGGGTGTAGCACCTGGCGTTATTGGGTCTCTTGCAACTGGTGCAACATATTTTGGTGTTATAGAGTCCACTAAAAAGTGGATTGAGGATTCACATCCTAGGCTTAAGGGCCACTGGGCACATTTCATTGCTGGAGCTGTTGGTTACAATCTGTTCTCTCATACTCCTTTAGGAGATACTCTTGGTTCTGTTGTATATGTTCCATGCGAAGTGATGAAGCAACGCATGCAAGTGCAGGGGACATATTCATCTTGGAGTTCTATCGCCATGAATGATGGCATTGCAATGAATTCTAGCCAAAAACTGTATGGTTATTATACAGGGATGTTCCATGCGGGCTGCTCAATATGGAGAACACAGGGCTTAAAGGGTTTATATGCAGGATATTTCTCTACTCTTGCAAGGGATGTTCCATTTGCTGGCCTAATGGTCATGTTTTATGAAGGTTTGAAAGATGTTACTGAATATGGGAAGCAAAGATTGACATCCAACTCAAATTGGCATGTCAATAACTCGTTTGAGGGACTCGTTTTAGGAGGATTAGCTGGTGGTCTTAGTGCATATCTCACCACCCCGTTGGATGTAATCAAAACAAGATTGCAAGTGCAGGGTTCAACTTTAAGGTATAACGGTTGGTTGGATGCAATTTGCAATATATGGGAAAAGGAAGGCATGAAGGGGATGTTCAGGGGTAGCATCCCAAGGATTTCATGGTACATTCCGGCTTCTGCACTTACATTTATGGCTGTGGAATTTCTCAGAGACCATTATAATGAAGGAGCCACTGACAAGAAGGTGCAAGAAGTTGCAAGACTATCAGTCGACAAGAAGAAACCAATGCAAGAGGTTTCTTAG 1119 0.437 MTSSMAVQSSNPREAKPSKNDLSSHFFVWREFVWGAVAGAFGEGMMHPVDTIKTRIQSQAILAGVQNQKSILQMVRLVWHEDGIRGFYRGVAPGVIGSLATGATYFGVIESTKKWIEDSHPRLKGHWAHFIAGAVGYNLFSHTPLGDTLGSVVYVPCEVMKQRMQVQGTYSSWSSIAMNDGIAMNSSQKLYGYYTGMFHAGCSIWRTQGLKGLYAGYFSTLARDVPFAGLMVMFYEGLKDVTEYGKQRLTSNSNWHVNNSFEGLVLGGLAGGLSAYLTTPLDVIKTRLQVQGSTLRYNGWLDAICNIWEKEGMKGMFRGSIPRISWYIPASALTFMAVEFLRDHYNEGATDKKVQEVARLSVDKKKPMQEVS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1955 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 137 241 IPR018108 -
Ahy10g1955 372 SUPERFAMILY Mitochondrial carrier 27 341 IPR023395 -
Ahy10g1955 372 Pfam Mitochondrial carrier protein 27 118 IPR018108 -
Ahy10g1955 372 Pfam Mitochondrial carrier protein 148 241 IPR018108 -
Ahy10g1955 372 Pfam Mitochondrial carrier protein 260 347 IPR018108 -
Ahy10g1955 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 258 344 IPR018108 -
Ahy10g1955 372 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 5 368 - -
Ahy10g1955 372 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 5 368 - -
Ahy10g1955 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 115 IPR018108 -
Ahy10g1955 372 Gene3D Mitochondrial carrier domain 183 361 IPR023395 -
Ahy10g1955 372 Gene3D Mitochondrial carrier domain 6 182 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1955 Ahy-Chr10 105639156 105643927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1955 28 349 EF-hand Containing Proteins AT2G35800 28.000 6.24e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1955 - - ahf:112716291 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2436 20 130094853 130099630 Ahy10g1955 10 105639156 105643927 hybridization