Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2421 ATGGTTGATTCTCCTCTAAAGACTAGTGCTACTATGGAGGAATTAAAATTACCATCCAAGCAGAGTCTGGAAGGAAAGGAAAAGGAACAAGGTGAAGCTGCTGAACATTCTTCTGTGAAGAATGATACTACTGCAAAAGAAATCAATCCATCACGGGATCGGAAAAGGTGGAGAAAGAAAGAGAAGAAACAAGGTGAAGCTGCTGAGCATAAAGGTTATCAGTTTTCAGTGGATATTTCTTCTGTGAAGAAAGATACTACTGTAAAGGAGGTAGATTCATTGCTATGTAAAAATGTTGATCCTAAAAACAAAGGTCCTAATGTTTCGCTGGATAATTGTTCGCCACAGACTGATGCCCCTTCTGAGAAGATAAATTCATCACCGAAGCCGAAAAGGGAAAGAAAGGAGAAGAAACCGGTTGAAGCTGTTGAGCATAAAGATCAAGGTCCTGATGTTTCACTTGGTAAATCTACTCCAAATACTGATATGGATAATGAATTTTCTAATATTGATGCTACTAGAGAGGATGTAAGTTCATCATCGAAGCGGAAAAGGAAGAGAAAGAAGAAGAAACAAGAAAAAGCTGTTGAAGATAAAGGCCCTCGTGCTTCACTGGATAAGAATTCTCAGAAGATTGATGATACCGCAGAGGATTCGTTAAACATATCCCCAGCTTTACCTAATCCTTTAGGCTCCCAAGATATTGTAGAATGTAGTTCTAAGAAGAGAAACAAAAGAAGGAAACGGCAGAAGACAAAATATAATGCTCTTGAAAGCATTGTTAACACTAATGATGTGCCAAAAGATACCTTTTCATCAAAATTTTGTACACCTGCCTTGCATATGCCTTCAGAACATCCAATTCAATTTGGGTCCACTGATTCTATAAGAGGAAAATCTTGTGCAGAGACAAATATTTGTCAGCAAGACAATGACAAGGGGGATCAGCATATACCAATAAAGGAAGCGGAAAACACCAATGGGGAGCATGTTGTTCAAGACATAAGCCGGTCCTACAACTCAAAGAATAAGCTTCTTATCCTTGATATGAATGGACTTCTAGCTGACTTTGCCAAAAAGGTTCCTCAAGGAAGTAAAAGTCCGGATTTTAAAATTTATGGGGGAAGAAAAGGGTCGATAAAAGTTTTCAAGAGGCCCTTCTGTGATGAGTTTATACAGTTTTGTCTTGACAGGTTTCATGTGGGTGTTTGGTCATCTAGAAAGAAGAAAAAGCTTGGTACAGCAGTCAACAAAATTTTTGGGGAATCAGCATCCAAACTGCTCTTTCGATGGGATCAGTCCCACTGTACGAAAACAGGATCTTGTACCCTTGAGGACAAAGGCAAGCCAATTGTGTTCAAGGAACTTCGAAAGTTATGGGAAAAAGTGGATGCCAGTCTTCCATGGAAGAAGGGAGAGTTTAATGAGTCAAACACATTATTGTTGGATGACTCCCCTTACAAAGCATTACTGAATCCTAGGAACACAGCAATATTTCCCAATCCTTACCATTTTGATGATGTTGATGACACATCATTAGGGCTGGGAAGTGATCTTCATATGTACCTTGAAGGGCTGGCTGGGGCTGAGAATGTTCAAGAGTATGTGGCATCACATCCATTTGGCCAAGAGGCCATAACCGAAACACACCGGTCTTGGAATTTCTATCGCAAAGTTATTGAAGCAGTTAAACGCAACAAAATTGCTGCTCAGATGCGGGCTATGTCTAGGGGACAATTGCAGAGCTCCACCGTAACAGGCGAAAATACTGTCCATTTGCTTCCTGCTGCCGGTGATCCTCCACAAGAGCCCACAACACTTGTTGCTAGCGCCACCGATGATCCACAGTTGACCAAGGCGCCACCACCTCCCACTACCCGAGATCCACTACAATTGACTGATCCAGTGCCACTTCCTTCCACAGCCACTGCGGCAATGCTTCCTTAA 1947 0.415 MVDSPLKTSATMEELKLPSKQSLEGKEKEQGEAAEHSSVKNDTTAKEINPSRDRKRWRKKEKKQGEAAEHKGYQFSVDISSVKKDTTVKEVDSLLCKNVDPKNKGPNVSLDNCSPQTDAPSEKINSSPKPKRERKEKKPVEAVEHKDQGPDVSLGKSTPNTDMDNEFSNIDATREDVSSSSKRKRKRKKKKQEKAVEDKGPRASLDKNSQKIDDTAEDSLNISPALPNPLGSQDIVECSSKKRNKRRKRQKTKYNALESIVNTNDVPKDTFSSKFCTPALHMPSEHPIQFGSTDSIRGKSCAETNICQQDNDKGDQHIPIKEAENTNGEHVVQDISRSYNSKNKLLILDMNGLLADFAKKVPQGSKSPDFKIYGGRKGSIKVFKRPFCDEFIQFCLDRFHVGVWSSRKKKKLGTAVNKIFGESASKLLFRWDQSHCTKTGSCTLEDKGKPIVFKELRKLWEKVDASLPWKKGEFNESNTLLLDDSPYKALLNPRNTAIFPNPYHFDDVDDTSLGLGSDLHMYLEGLAGAENVQEYVASHPFGQEAITETHRSWNFYRKVIEAVKRNKIAAQMRAMSRGQLQSSTVTGENTVHLLPAAGDPPQEPTTLVASATDDPQLTKAPPPPTTRDPLQLTDPVPLPSTATAAMLP* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2421 648 MobiDBLite consensus disorder prediction 595 648 - -
Ahy20g2421 648 MobiDBLite consensus disorder prediction 105 124 - -
Ahy20g2421 648 MobiDBLite consensus disorder prediction 19 69 - -
Ahy20g2421 648 MobiDBLite consensus disorder prediction 193 214 - -
Ahy20g2421 648 MobiDBLite consensus disorder prediction 153 167 - -
Ahy20g2421 648 MobiDBLite consensus disorder prediction 215 237 - -
Ahy20g2421 648 SUPERFAMILY HAD-like 336 537 IPR036412 -
Ahy20g2421 648 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 30 567 - -
Ahy20g2421 648 Pfam NLI interacting factor-like phosphatase 344 532 IPR004274 -
Ahy20g2421 648 SMART forpap2 342 510 IPR004274 -
Ahy20g2421 648 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 30 567 - -
Ahy20g2421 648 ProSiteProfiles FCP1 homology domain profile. 339 526 IPR004274 -
Ahy20g2421 648 Gene3D - 301 542 IPR023214 -
Ahy20g2421 648 MobiDBLite consensus disorder prediction 83 97 - -
Ahy20g2421 648 MobiDBLite consensus disorder prediction 125 151 - -
Ahy20g2421 648 MobiDBLite consensus disorder prediction 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2421 Ahy-Chr20 129439148 129444060 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2421 - - aip:107623105 1251.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2421 20 129439148 129444060 Ahy20g2421 20 129439148 129444060 ECH
Ahy20g2421 20 129439148 129444060 Ahy10g1933 10 105015750 105020492 hybridization