Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1933 ATGGAGGAATTAAAATTACCATTGAAGCAGAGTCTGGAAGGAAAGGAAAAGGAACAAGGTGAAGCTGCTGAACATTCTTCTGTGAAGAATGATACTACTGCAAAAGAAGTGAATCCATCACGGGATCGGAAAAGGCGGAGAAAGAAAGAGAAGAAACAAGGTGAAGCTGCTGAGCATAAAGGTTATCAGATTTCAGTGGATAATTGTTCGCGGCAGACTGATGCCCCTTCTGAGAAGATAAATTCATCACTGAAGCCAAAAAGGGAAAGAAAGGAGAAGAAACCGGTTGAAGCTGTTGAGCATAAAGATAAAGATCCTGATGTTTCACTTGGTAAATCTACTCCAAATACTGATATGCATAATAAATTTTCTAATATTGATGCTACTAGAGAGGATGTAAGTTCATCATCAAAGCGGAAAAAGAAGAGAAAGAAGAAGAAACAAGAAAAAGCTGTTGAAGATAAAGGTCCTCATGCTACACCGGATAAGAATTCTCGGAAGATTGATGATACAGCAGAGGATTCGTTACACATATCCCCAGCTTTACCTAATCCGTTAGGCTCCCAAGATATTGTAGAATGTAGTTCTAAGAAGAGAAACAAAAGAAGGAAACGGCAGAAGACAAAATATAATGCTGTTGAAAGCATTGTCAACACTAATGATGTGCCAAAAGATACCTTTTCATCAAAATTTTGTACACCTGCCTTGCATATGCCTTCAGAACATCCAATTCAATTTGGGTCCGCTGATCCTATAAGAGGACAATCTTGTGCGGAGACAAATATTTGTCAGCAAGACAATGACAAAGGGGATCAGCATATACCAATAAAGGAAGCGGAAAACACCAGTGGGGAGTATGTTGTTAAAGACATAAGCCGGTCCTACAACTCAAAGAATAAGCTTCTTATCCTTGACATGAATGGACTTCTAGCTGACTTTGTCAAAAAGGTTCCTCAAGGAAGTAAAAGTCCGGATTTTAAAATTTATGGGGGAAGAAAAGGGTCGATAAAAGTTTTCAAGAGGCCCTTCTGTGATGAGTTTATACAGTTTTGTCTTGACAGGTTTCATGTGGGTGTTTGGTCATCTAGAAAGAAGAAAAATCTTGGTAGAGCAGTCAACCAAATTTTTGGGGAATCAGCATCCAAACTGCTCTTTCAATGGGATCGGTCCCACTGTACGAAAACAGGATCTTGTACCCTTGAGGACAAATTCAAGCCAATTGTGTTCAAGGAACTTCGAAAGTTATGGGAAAAAGTGGATGCCAGTCTTCCATGGAAGAAGGGAGAGTTTAATGAGTCAAACACATTATTGTTGGATGACTCCCCTTACAAAGCATTACTGAATCCTAGGAACACAGCAATATTTCCCAATCCTTACCATATTGATGATGTTGATGACACATCACTAGGGCTGGGAGGTGATCTTCATATGTACCTTGAAGGGCTGGCTGGGGCTGAGAATGTTCAAGAGTATGTGGCATCACATCCATTTGGCCAAAAGGCCATAACCGAAACACACCCGTCTTGGGATTTCTATCGCAAAGTTATTGAAGCAGTTAAACGCAACAAAATTGCTGCTCAGATGCGGGCTATGTCTAGGGGACAATTGAAGAGCTCCACCGTAACAGGCGAAAATACTGTCCATTTGCTGCCTGCTGCCGGCGATCCTCCACAAGAGCCCACAGCACTTGTTGCTAGTGCCACCGGTGATCCTCAGTTGACCAAGGCGCCACCACCTCCCACTACCCGAGATACACTACAATTGACTGATCCAGTGCTACTTCCTTCCACAGCCACTGCGGCAATGCTTCCTTAA 1815 0.4193 MEELKLPLKQSLEGKEKEQGEAAEHSSVKNDTTAKEVNPSRDRKRRRKKEKKQGEAAEHKGYQISVDNCSRQTDAPSEKINSSLKPKRERKEKKPVEAVEHKDKDPDVSLGKSTPNTDMHNKFSNIDATREDVSSSSKRKKKRKKKKQEKAVEDKGPHATPDKNSRKIDDTAEDSLHISPALPNPLGSQDIVECSSKKRNKRRKRQKTKYNAVESIVNTNDVPKDTFSSKFCTPALHMPSEHPIQFGSADPIRGQSCAETNICQQDNDKGDQHIPIKEAENTSGEYVVKDISRSYNSKNKLLILDMNGLLADFVKKVPQGSKSPDFKIYGGRKGSIKVFKRPFCDEFIQFCLDRFHVGVWSSRKKKNLGRAVNQIFGESASKLLFQWDRSHCTKTGSCTLEDKFKPIVFKELRKLWEKVDASLPWKKGEFNESNTLLLDDSPYKALLNPRNTAIFPNPYHIDDVDDTSLGLGGDLHMYLEGLAGAENVQEYVASHPFGQKAITETHPSWDFYRKVIEAVKRNKIAAQMRAMSRGQLKSSTVTGENTVHLLPAAGDPPQEPTALVASATGDPQLTKAPPPPTTRDTLQLTDPVLLPSTATAAMLP* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1933 604 MobiDBLite consensus disorder prediction 1 40 - -
Ahy10g1933 604 ProSiteProfiles FCP1 homology domain profile. 295 482 IPR004274 -
Ahy10g1933 604 MobiDBLite consensus disorder prediction 551 604 - -
Ahy10g1933 604 Pfam NLI interacting factor-like phosphatase 300 488 IPR004274 -
Ahy10g1933 604 MobiDBLite consensus disorder prediction 65 80 - -
Ahy10g1933 604 SUPERFAMILY HAD-like 292 493 IPR036412 -
Ahy10g1933 604 MobiDBLite consensus disorder prediction 149 174 - -
Ahy10g1933 604 MobiDBLite consensus disorder prediction 579 594 - -
Ahy10g1933 604 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 24 523 - -
Ahy10g1933 604 Gene3D - 257 499 IPR023214 -
Ahy10g1933 604 MobiDBLite consensus disorder prediction 1 209 - -
Ahy10g1933 604 SMART forpap2 298 466 IPR004274 -
Ahy10g1933 604 MobiDBLite consensus disorder prediction 81 109 - -
Ahy10g1933 604 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 24 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1933 Ahy-Chr10 105015750 105020492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1933 - - aip:107623105 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2421 20 129439148 129444060 Ahy10g1933 10 105015750 105020492 hybridization