Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2239 ATGGCATCTATTAGAAGAACTTTGTCTCCAGTGCCTCGAGCTGGAGGCGTGGCTAATCTAGAAGTGTGTTCAGTAGGATCTCCCTTGTCTAAGTCCTCGTCGAGTCCTCATAGCTCGTTTGGCTCACTGGACTCCCGGGCTTTCGTGCTCGGCGTTTTCTCGCCGAGATCTTTGAGGTCACTTGAGAGGTCAAAGCCAAAGAGCCAGCTCTGGAGGAAAGTGCTTTTGCATTTTTTCATTTGCTTCATGATTGGTGTTTCCATTGGATTCATCCCTCTTGCATCAAGGAACTTGTCCACTAGTCTCATGCCAAAGCACCAAGCATTCTCTTTTGAAAATACCAAGATAGATTTTACTTCATCAATTAATGAGACCACGGAATTTAATGCTACTTTGAATTTAGCTGTGAAAGAACAGGAACAGATAGATAAAGTGAGAAATGATGTTTCCAATGACAAATTACTCAATGAAGAGCCATATTTGGAGTCTCAGAAGCTTCTCATAATTGTGACCCAAACAGTAACCAATCCGTTTCAAGCATATTATTTGCATCGGTTGGCGCAGACTTTGAAATTGGTCTCGCCTCCATTGTTGTGGATTGTTGTTGAGATGACTTCCCAATCCGAAGAAACTGCTGAAATCTTGAGGAGTAGCGGGATTATGTATAGGCATCTCGTTTGCAAGTCGAATGTAACAGACACAAGCCTTCAGGGCATTCTTCAAAGAAATGTTGCGCTGTCTCACATTGAAACTCACCGGCTTGATGGAATTGTTTACTTTGCAGATGTTGATAACATCTATTCAGTCGAGATCTTTCAGCAAATCAGAGAGATAAGGCGATTCGGAACATGGACTGTAGCAAAACTATCAGGGGATAAAGGTAGCATTGTCTTACAAGGGCCTGTTTGTGATGGAGCTCGAGTAATCGGATGGCATGTCAATGACTCGAATAGGAGATCGAAAAGATTTCACATTGAGATGCCAGGTTTTGCCTTCAATAGTACGATACTCTGGGATCCAAAGAGGTGGCACAGACCTACACTTGAACCTATCAGGCAGCTAGACTCAGTTAAGGAAAGTTTTCGGGTTAGCACATTGATTGAGCAAGTGGTCGAAGACGAAAGCCAAATGGAAGGCTTAATGAACAATTGCTCTAGTGTTATGGTCTGGCATATTGATCTTGAACCATCTCATTCTTTCTATCCACAGAAATGGATGATCAAGAACTACCTAGATGTCATTCTTCCACTTGTGTGA 1257 0.4264 MASIRRTLSPVPRAGGVANLEVCSVGSPLSKSSSSPHSSFGSLDSRAFVLGVFSPRSLRSLERSKPKSQLWRKVLLHFFICFMIGVSIGFIPLASRNLSTSLMPKHQAFSFENTKIDFTSSINETTEFNATLNLAVKEQEQIDKVRNDVSNDKLLNEEPYLESQKLLIIVTQTVTNPFQAYYLHRLAQTLKLVSPPLLWIVVEMTSQSEETAEILRSSGIMYRHLVCKSNVTDTSLQGILQRNVALSHIETHRLDGIVYFADVDNIYSVEIFQQIREIRRFGTWTVAKLSGDKGSIVLQGPVCDGARVIGWHVNDSNRRSKRFHIEMPGFAFNSTILWDPKRWHRPTLEPIRQLDSVKESFRVSTLIEQVVEDESQMEGLMNNCSSVMVWHIDLEPSHSFYPQKWMIKNYLDVILPLV* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2239 418 CDD GlcAT-I 165 396 IPR005027 GO:0015018|GO:0016020
Ahy20g2239 418 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 166 409 IPR029044 -
Ahy20g2239 418 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 41 415 IPR005027 GO:0015018|GO:0016020
Ahy20g2239 418 Pfam Glycosyltransferase family 43 186 395 IPR005027 GO:0015018|GO:0016020
Ahy20g2239 418 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 41 415 - -
Ahy20g2239 418 SUPERFAMILY Nucleotide-diphospho-sugar transferases 166 410 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2239 Ahy-Chr20 124010455 124014065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2239 1 417 Glycosyltransferase AT1G27600 45.735 4.35e-117 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2239 K20869 - gmx:100808765 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2239 20 124010455 124014065 Ahy20g2239 20 124010455 124014065 ECH
Ahy20g2239 20 124010455 124014065 Ahy10g1795 10 100767483 100771098 hybridization