Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1795 ATGGCATCTATTAGAAGAACTTTGTCTCCAGTGCCTCGAGCCGGAGGCGTGGCTAATCTAGAAGTGTGTTCAGTAGGATCTCCCTTGTCTAAGTCCTCGTCGAGTCCTCATAGCTCAGCGTTCGTGCTCGGCGTTTTCTCGCCGAGATCTTTGAGGGCACTTGAGAGGTCAAAGCCAAAGGGCCAGCTCTGGAGGAAAGTGCTTTTGCATTTTTTCATTTGCTTCATGATTGGTGTTTCCATTGGATTCATCCCTCTTGCATCAAGGAACTTGTCCACTAGTCTCATGCCAAAGCACCAAGCATTCTCTTTTGAAAATACCAAGATAGATTTGACTTCATCAATTAATGAGACCACGGAATTTAATGCTACTTTGAATTCAACTGTGAAAGAACAGGAACAGATAGATAAAGTGAGAAATGATGTTTCCAATGACAAATTACTCAATGAAGAGCCATATTTGGAGTCTCAGAAGCTTCTCATAATTGTGACCCAAACAGTAACCAATCCGTTTCAAGCATATTATTTGCATCGGTTGGCGCAGACTTTGAAATTGGTCTCGCCTCCATTGTTGTGGATTGTTGTTGAGATGACTTCCCAATCTGAAGAAACTGCTGAAATCTTGAGGAGTAGTGGGATTATGTATAGGCATCTCGTTTGCAAGTCGAATGTAACAGACACGAGCCTTCAGGGCATTCTTCAAAGAAATGTTGCGCTGTCTCACATTGAAACTCACCGGCTTGATGGAATTGTTTACTTTGCAGATGTTGATAACATCTATTCAGTCGAGATCTTTCAGCAAATCAGAGAGATAAGGCGGTTCGGAACATGGACTGTAGCAAAACTATCAGGGGATAAAGGTAGCATTGTCTTACAAGGGCCTGTTTGTGATGGAGCTCGAGTAATCGGATGGCATGTCAATGAATCGAATAGGAGATCGAAAAGATTTCACATTGAGATGCCAGGTTTTGCCTTCAATAGTACGATACTCTGGGATCCAAAGAGGTGGCACAGACCTACACTTGAACCTATCAGGCAGCTAGACTCAGTTAAGGAAAGTTTTCGGGTTAGCACATTGATTGAGCAAGTGGTCGAAGACGAAAGCCAAATGGAAGGCTTAATGAACAATTGCTCTAGTGTTATGGTCTGGCATATTGATCTTGAACCATCTCATTCTTTCTATCCACAGAAATGGATGATCAAGAACTACCTAGATGTCATTCTTCCACTTGTGTGA 1236 0.4256 MASIRRTLSPVPRAGGVANLEVCSVGSPLSKSSSSPHSSAFVLGVFSPRSLRALERSKPKGQLWRKVLLHFFICFMIGVSIGFIPLASRNLSTSLMPKHQAFSFENTKIDLTSSINETTEFNATLNSTVKEQEQIDKVRNDVSNDKLLNEEPYLESQKLLIIVTQTVTNPFQAYYLHRLAQTLKLVSPPLLWIVVEMTSQSEETAEILRSSGIMYRHLVCKSNVTDTSLQGILQRNVALSHIETHRLDGIVYFADVDNIYSVEIFQQIREIRRFGTWTVAKLSGDKGSIVLQGPVCDGARVIGWHVNESNRRSKRFHIEMPGFAFNSTILWDPKRWHRPTLEPIRQLDSVKESFRVSTLIEQVVEDESQMEGLMNNCSSVMVWHIDLEPSHSFYPQKWMIKNYLDVILPLV* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1795 411 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 38 408 - -
Ahy10g1795 411 SUPERFAMILY Nucleotide-diphospho-sugar transferases 159 403 IPR029044 -
Ahy10g1795 411 CDD GlcAT-I 158 389 IPR005027 GO:0015018|GO:0016020
Ahy10g1795 411 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 159 402 IPR029044 -
Ahy10g1795 411 Pfam Glycosyltransferase family 43 179 388 IPR005027 GO:0015018|GO:0016020
Ahy10g1795 411 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 38 408 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1795 Ahy-Chr10 100767483 100771098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1795 1 410 Glycosyltransferase AT1G27600 46.172 9.07e-119 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1795 K20869 - gmx:100808765 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2239 20 124010455 124014065 Ahy10g1795 10 100767483 100771098 hybridization