Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2215 ATGGTTCTTGCACCAAAGTGTTCCATTCATCCCAAACGACCTTTCATCTTCTCACATGGCTTTGATCACTCCACTGCTGCTGGATTCTCCACCATATTCAACCCAATGTTAAGATCTTTGCAACAAATTACATTGCAAATCGATGCTTCCAAAGCCATGAAAAGCATCACAACAAAATTCCTTGATGCTGTTGTGGATTCAGTTTTCCAGTTTGTTGATTTGCCACGCCTTCCATCTCAGAGTAACTTTGCTCCGGTAGAGGAGATAGGAGAGCCCATACTTATCACTGATATTGAAGGTGAAATACCAAAGGGATTTCCAGAAGGTGTCTACATTAGAAATGGATCAAACCCACTGTTTGGAGGGTTGAAATCAACAAAGTCAATTTTGGGGAGTTCAGATAGTGCTTGGGTGGAAGGAGAAGGAATGCTTCATGCTTTGTATTTCAAAAAGCAAATTGATGAAAATGATGGGAATTACACTCTTGTGTACAACAACAAACATGTTGAAACTTCATCATATAGGCTTGAGAAACAAAGTACTAAGCCTTTGTTTCTTCCTGCTGTCAAAGGAGATTCACTTGCTGTTCTATCTTCTCTCATGCTAAACAAGTTGAGATTTGGAGAAAACTATAAATATTATAGCAACACCAATGTGATTGAGCATTCAGGAAAGTTCTATTCAGTTACTGAAAGTCACCTTCCTTTTGAGATTGATATTTTCACATTAAATACTTTGAATCAATGGGATTTCAATGGAGTATGGAATCGTCCTTTTGGCAGCCACCCTAAGAAAGTTCTAGATACCGGAGAGCTGGTTATCTTTGGAGTAGAGGCAACCAAACCTTTTCTTGAAATTGGAATAGTTTCTGCTGATGGAAAAGAATTGGTTCATAAAGTGGATATAAAACTAGACAGATGCTGTCTTTGCCATGAGATAGGTATCACACAAAGATACATTGTGATATTGGATTATCCACTCATAATTGACCCAAACAGACTTCTTAGAAGAGGCCAATTGATAGAATATGAGAAGGAGAAATACGCGAGGATTGGGATTATGCCCATATATGGTGATGCAGATTCAATCAAATGGTTTGAGGTCACACCTCATAGTACATTTCATTTTATTAACTCTTTTGAGGAAGGTCACGAGGTGGTGGTGTGGGGTTGCAGAGCATTAGATTCAATAATTCCAGGGCCAGATGCAGGACTGAATAATGATTCTAAGTTTTTCTCTCGTTGTTATGAATGGCGATTAAACATGAAAACTGGGGAGGTTAATGAGAAATATCTCACTAATGGACCAAATCAGTTCATGGATTTTCCTGTGCTCCATGAAAGTTTTATTGGAGTTAAGAATAAATACGCATACACCCAAGTGGTGGATCCTAATGCAAGCTTTGCTGCAGATATGCCAAAATATGGAGGTCTAGCTAAGTTATACTTTGAAGAACAACTATCATCTGAGGAAAATGTTATAAGAACGGAATATCATGCATTTGAAAGCAGCAATATGTTCTGCACTGGACTCGCCTTTGTCCCTAAAGAAAAAGGGGGCATCAAAATGGAAAAAGAAGAAGATGATGGTTGGATCATTGCTTTTGTTCACAATGAAGACACTAACTTATCACAAGTTCATATAATTGATGGAAAGAAGTTAAGTGGTGAGGCAGTTGCCAAGATTACATTGCCATGCAGAGTTCCTTACGGCTTTCATGGAGCTTTCATGCCAATCTCTTTTCAACCTTCAACTCCCTCATCATAG 1767 0.3854 MVLAPKCSIHPKRPFIFSHGFDHSTAAGFSTIFNPMLRSLQQITLQIDASKAMKSITTKFLDAVVDSVFQFVDLPRLPSQSNFAPVEEIGEPILITDIEGEIPKGFPEGVYIRNGSNPLFGGLKSTKSILGSSDSAWVEGEGMLHALYFKKQIDENDGNYTLVYNNKHVETSSYRLEKQSTKPLFLPAVKGDSLAVLSSLMLNKLRFGENYKYYSNTNVIEHSGKFYSVTESHLPFEIDIFTLNTLNQWDFNGVWNRPFGSHPKKVLDTGELVIFGVEATKPFLEIGIVSADGKELVHKVDIKLDRCCLCHEIGITQRYIVILDYPLIIDPNRLLRRGQLIEYEKEKYARIGIMPIYGDADSIKWFEVTPHSTFHFINSFEEGHEVVVWGCRALDSIIPGPDAGLNNDSKFFSRCYEWRLNMKTGEVNEKYLTNGPNQFMDFPVLHESFIGVKNKYAYTQVVDPNASFAADMPKYGGLAKLYFEEQLSSEENVIRTEYHAFESSNMFCTGLAFVPKEKGGIKMEKEEDDGWIIAFVHNEDTNLSQVHIIDGKKLSGEAVAKITLPCRVPYGFHGAFMPISFQPSTPSS* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2215 588 PANTHER BETA-CAROTENE DIOXYGENASE 30 579 IPR004294 GO:0016702
Ahy20g2215 588 Pfam Retinal pigment epithelial membrane protein 84 578 IPR004294 GO:0016702
Ahy20g2215 588 PANTHER OS06G0162550 PROTEIN 30 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2215 Ahy-Chr20 123155811 123175715 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2215 - - gmx:100817207 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2215 20 123155811 123175715 Ahy20g2215 20 123155811 123175715 ECH
Ahy20g2215 20 123155811 123175715 Ahy10g1777 10 100100643 100106940 hybridization