Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1777 ATGGCGATGATTGGTTTGCCTGAATTCCCGAAAATTGTGGCAACTTCTGCTGTTAGATTGGTTGATGCTTTTGTGGATTCATTCTTTGAATTCATTGATCAGCCATTGCTTCCATCTCAGAATAACTTTGCTCCGGTGGAGGAGTTGGGAGAAACAATGGTTGTGACTAACAACATCGATGGCCATATTCCGAATGGTTTTCCTGAGGGTGTCTACATCAGAAATGGACCAAATCCACTATTTGGAGGACTGAAATCAACAAATTCAATATTTGGGAAGACAAGTCACGTATGGGTGGAAGGAGAGGGAATGCTTCATGCATTGTATTTCAATTATAATAATAATAATAATAATTGGACGGTTCTATACAACAACAGGCACGTTGAAACTGAGACCTACAAGCTTGAAAAACAAAGGAACAAACCATCATTTTTGCCGGCCATTCAAGGCGATTCACTTGCCATTTTGTTTGCATACCTCTTAAATTTGTTGAGATTTGGCAAAGTAAACAAATACATTAGCAACACCAATGTGTTTGAGCATTCAGGCAAGTTTTATTCCGTGGCTGAAAGTCACATCCCACAAGAGATTGACATCTTTACCCTCAAAACCTTAAGGAATTGGGATGTCAATGGAGCCTGGAATAGACCCTTTTGCAGCCACCCAAAGAAAGCCCCAGGTACAGGGGAGCTTGTCACATTAGGAATATCTCCAATTTTACCTTTTTGTGAACTTGGAATAATTTCTGCTGATGGGAAAAAATTGGATCACAAAGTTGATCTCAAACTGAACAGGTGCACCCTTTGCCATGAACTAGGTGTTACACAGAGGTACAATGTAATCATGGATTTTCCACTGACCATTGATCTACTCAGACTTGTTAAAGGAGAGCAACTAATAAGGTATGATAAAGATGAATATGCAAGAATTGGTGTTATGCCACGCTATGGCGATGCAAGCTCAATCAAGTGGTTTGAAGTGGAGCCTAATTGCACCTTCCATATCATCAATTCTTTTGAGGAGGGTCATGAGGTTGTAGTAAGAGGCTGCAGATCTCTTGATTCATTGATTCCTGGACCTCATCCGAGTTCGAATGAATTCGATTGTCTGTCTCGTTGTTACGAATGGCGATTGAACATGGAAACAGGGGAAGTTAAGGAGAGAAGTCTGATCGGACCCAAAGTAGTGTATATGGATTTTCCTATGGTCAATGAAAACTTCATGGGTATCAAGAATAGATATGCATACACACAAGTAGTTGATCCACCTGCAAGCTCTACTCAAGATGTGCCAAAATATGGAGGTCTAGCAAAGCTCTACTTCGAAGAATCATCGAACAAACAACATGATGAAGATCCAATAAGGGTTGAATACCATATGTTTGAGAAGAACACATTTTGCAGTGGAGCTGCTTTTGTACCGAAAGATGGTGGTGTAGAAGAAGATGATGGTTGGATTATCAGTTTTGTTCATAACGAAGATAATGCCATATCTCAAGTTCATATAATTGATGGAAAGAAGTTAAGTGGTGAGGCAGTTGCCAAGATTACATTGCCATGCAGAGTTCCTTACGGTTTCCATGGAGCTTTCATGCCAATCTCTTTTCAGGCGTCTCACTAG 1620 0.4031 MAMIGLPEFPKIVATSAVRLVDAFVDSFFEFIDQPLLPSQNNFAPVEELGETMVVTNNIDGHIPNGFPEGVYIRNGPNPLFGGLKSTNSIFGKTSHVWVEGEGMLHALYFNYNNNNNNWTVLYNNRHVETETYKLEKQRNKPSFLPAIQGDSLAILFAYLLNLLRFGKVNKYISNTNVFEHSGKFYSVAESHIPQEIDIFTLKTLRNWDVNGAWNRPFCSHPKKAPGTGELVTLGISPILPFCELGIISADGKKLDHKVDLKLNRCTLCHELGVTQRYNVIMDFPLTIDLLRLVKGEQLIRYDKDEYARIGVMPRYGDASSIKWFEVEPNCTFHIINSFEEGHEVVVRGCRSLDSLIPGPHPSSNEFDCLSRCYEWRLNMETGEVKERSLIGPKVVYMDFPMVNENFMGIKNRYAYTQVVDPPASSTQDVPKYGGLAKLYFEESSNKQHDEDPIRVEYHMFEKNTFCSGAAFVPKDGGVEEDDGWIISFVHNEDNAISQVHIIDGKKLSGEAVAKITLPCRVPYGFHGAFMPISFQASH* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1777 539 PANTHER OS06G0162550 PROTEIN 8 533 - -
Ahy10g1777 539 Pfam Retinal pigment epithelial membrane protein 44 532 IPR004294 GO:0016702
Ahy10g1777 539 PANTHER BETA-CAROTENE DIOXYGENASE 8 533 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1777 Ahy-Chr10 100100643 100106940 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1777 - - ahf:112717820 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2215 20 123155811 123175715 Ahy10g1777 10 100100643 100106940 hybridization