Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2206 ATGGCTTTCTCAGTCTTACCCTCCTCACCATCAATCAGAAGCTCCATTTCATGTCCAAGAAGCATGGTTGTTTCTAATAAAATGTCTGATAATAAAAATAATAATGTTGGAGAAGGGTTCCTTTCACCTCCAAACAAGGGCATCTACAAAAGCACCGTTGCGAGGGTTGCGAGTCGTCGGGCCACTCCGCTACCGGCTCCGTCAGTGGCGGAAGGGCACCGGCACCATAGCGCATGGACTAGTATCCGTCAAGAGAGATGGGAAGGGGAGCTGGTTGTTCAAGGAGAAATACCATTGTGGCTGAAAGGAACATACCTGAGGAATGGGCCAGGCATGTGGCACATTGGAGACTACAACTTCCGGCACCTCTTTGACGGTTACGCCACCCTCGTCAAGCTCCACTTCGAAGAAGGCCGGTTAATCGCCGGCCACCGCCAACTGGAGTCACAAGCCTACCAAGCCGCCAAAAAGAACCAAAAGATCTGCTACCGCGAGTTCTCGGAGGTACCAAAGGCGGAGAACTTCCTGGCATACGTGGGAGAATTGGCGAGCCTGTTCTCCGGCGCATCCCTGACGGACAACGCCAACACCGGAGTGGTGAGGCTGGGCGACGGCAGGGTGGTGTGCCTGACGGAGACACAGAAGGGGTCTATCGTGATAGACCCCGAAACACTGGAGACTAAGGGAAAATTCTCCTACAGCGATTCTTTGGGGGGTTTGATTCACTCGGCGCATCCGATTGTGACGGAGGAGGAGTTCTTGACTCTGTTGCCGGATCTGGTGAAGCCTGGCTACGTGGTGGCAAGAATGGAGAAGGGAAGTAATGAGAGGAAGGTGATTGGAAGAGTCAACTGTAGGGGTGGACCTGCACCTGGCTGGGTCCACTCTTTCCCTGTCACCCAGAATTATGTTGTTGTTCCCGAAATGCCCTTGAGGTACTCTGCTCAGAATCTTCTTAAGGCTGAGCCTACCCCTTTGTACAAGTTCCGCTGGTACCCTGACAACAATGCTTACATGCATGTCATGTGCAAGGCCACTGGCAACATTGTGGCAAGTGTGGAGGTGCCTCTGTTTGTTCAGTTCCATTTCATAAATGCATATGAAGAGAAAGATGAAGATGGAAGAGTTACGGCGATAATCGCCGACTGTTGTGAGCACAATGCAAATACCGACATTCTTGAGAAGCTCAGACTAAACAACCTTCGTTCCTATAATGGTGAAGATGTTCTACCCAACGCTAGGGTTGGTCGATTCCGAATACCATTTGATGGGAGTCCATATGGAACCTTGGAGGCAGCATTAGATCCAAATGAACATGGGAGAGGCATGGACATGTGCACCATAAACCCTAATTATTTAGGAAAGAAATATAGATATGCTTATGCTTGTGGAGCACATCGCCCTTGTAACTTTCCCAACACCATCACCAAGATTGATTTTGAGTTGAAAAAGGCTAAGAACTGGTATGAAGAAGGTACTGTGCCCTCGGAACCATTCTTTGTAGCTCGGCCGGGTGCAACCGAAGAAGACGATGGCGTGGTAATCTCAGTAGTTAGTGAGAAAAATGGAGGAGCATATGCGTTGGTGTTAGATGGTTCCACTTTTCAAGAGATTGCTAGGGCCAAGTTCCCTTATGCAATTCCATATGGGTTGCATGGATGCTGGGTTCCAAAAAATTAG 1680 0.4946 MAFSVLPSSPSIRSSISCPRSMVVSNKMSDNKNNNVGEGFLSPPNKGIYKSTVARVASRRATPLPAPSVAEGHRHHSAWTSIRQERWEGELVVQGEIPLWLKGTYLRNGPGMWHIGDYNFRHLFDGYATLVKLHFEEGRLIAGHRQLESQAYQAAKKNQKICYREFSEVPKAENFLAYVGELASLFSGASLTDNANTGVVRLGDGRVVCLTETQKGSIVIDPETLETKGKFSYSDSLGGLIHSAHPIVTEEEFLTLLPDLVKPGYVVARMEKGSNERKVIGRVNCRGGPAPGWVHSFPVTQNYVVVPEMPLRYSAQNLLKAEPTPLYKFRWYPDNNAYMHVMCKATGNIVASVEVPLFVQFHFINAYEEKDEDGRVTAIIADCCEHNANTDILEKLRLNNLRSYNGEDVLPNARVGRFRIPFDGSPYGTLEAALDPNEHGRGMDMCTINPNYLGKKYRYAYACGAHRPCNFPNTITKIDFELKKAKNWYEEGTVPSEPFFVARPGATEEDDGVVISVVSEKNGGAYALVLDGSTFQEIARAKFPYAIPYGLHGCWVPKN* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2206 559 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 14 559 - -
Ahy20g2206 559 PANTHER BETA-CAROTENE DIOXYGENASE 14 559 IPR004294 GO:0016702
Ahy20g2206 559 Pfam Retinal pigment epithelial membrane protein 82 557 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2206 Ahy-Chr20 122634248 122639839 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2206 K17913 - gmx:100794831 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2206 20 122634248 122639839 Ahy20g2206 20 122634248 122639839 ECH
Ahy20g2206 20 122634248 122639839 Ahy10g1764 10 99462868 99468278 hybridization