Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1764 ATGGCTTTCTCAGTCTTACCCTCCTCACCATCAATCAGAAGCTCCATTTCATATCCAAGAAGCATGGTTGTTTCTAATAAAATGTCTGATAATAAAATTAATAATGTTGGAGAAGGGTTCCTTTCACCTCCAAACAAGGGCATCTACAAAAGCCAACGCTCCCTTCAAGACTTGACCGTTGCGAGTGTTGCGAGTCGTCTACCGCCTCCGTCAGTGGCGGAAGGGCACTGGCACCATAGCGCATGGACTAGTATCCGTCAAGAGAGATGGGAAGGGGAGCTGGTTGTCCAAGGAGAAATACCATTGTGGCTGAAAGGAACATACCTGAGGAATGGGCCAGGCATGTGGCACATTGGAGACTACAACTTCCGGCACCTCTTTGACGGTTACGCCACCCTCGTCAAGCTCCACTTCGAAGACGGCCGGTTAATCGCCGGCCACCGCCAACTGGAGTCACAAGCCTACCAAGCCGCCAAAAAGAACCAAAAGATCTGCTACCGCGAGTTCTCGGAGGTACCAAAGGCGGAGAACTTCCTGGCATACGTGGGAGAATTGGCGAGCCTGTTCTCCGGCGCATCCCTGACGGACAACGCCAACACCGGAGTGGTGAGGCTCGGCGACGGCAGGGTGGTGTGCCTGACGGAGACACAGAAGGGGTCTATTGTGATAGACCCCGAAACACTGGAGACTAAGGGAAAATTCTCCTACAGCGATTCTTTGGGCGGTTTGATTCACTCGGCGCATCCGATTGTGACGGAGGAGGAGTTCTTGACTCTGTTGCCGGATCTGGTGAAGCCTGGCTACGTGGTGGCAAGAATGGAGAAGGGAAGTAATGAGAGGAAGGTGATTGGAAGAGTCAACTGTAGGGGTGGACCTGCACCTGGCTGGGTCCACTCTTTCCCTGTCACCCAGAATTATGTTGTTGTTCCCGAAATGCCCTTGAGGTACTCTGCTCAGAATCTTCTTAAGGCTGAGCCTACCCCTTTGTACAAGTTCCGCTGGTACCCTCACAACAATGCTTACATGCATGTCATGTGCAAGGCCACTAGCAAGATTGTGGCAAGTGTGGAGGTGCCTCTGTTTGTTCAGTTCCATTTCATAAATGCATATGAAGAGAAAGATGAAGATGGAAGAGTTACGGCGATAATCGCCGACTGTTGTGAGCACAATGCAAATACCGACATTCTTGAGAAGCTCAGACTAAACAACCTTCGTTCCTATAATGGTGAAGATGTTCTACCCGACGCTAGGGTTGGTCGATTCCGAATACCTTTTGATGGGAGTCCATATGGAACCTTGGAGGCAGCATTAGATCCAAATGAACATGGGAGAGGCATGGACATGTGCACCATAAACCCTAATTATTTAGGAAAGAAATATAGATATGCTTATGCTTGTGGAGCACATCGCCCTTGTAACTTTCCCAACACCATCACCAAGATTGATTTTGAGTTGAAAAAGGCTAAGAACTGGTATGAAGAAGGTACTGTGCCCTCGGAACCATTCTTTGTAGCTCGGCCGGGTGCAATCGAAGAAGACGATGGCGTGGTAATCTCAGTAGTTAGTGAGAAAAATGGAGGAGCATATGCGTTGGTGTTAGATGGTTCCACTTTTCAAGAGATTGCTAGGGCCAAGTTCCCTTATGCAATTCCATATGGGTTGCATGGATGCTGGGTTCCAAAAAATTAG 1689 0.4908 MAFSVLPSSPSIRSSISYPRSMVVSNKMSDNKINNVGEGFLSPPNKGIYKSQRSLQDLTVASVASRLPPPSVAEGHWHHSAWTSIRQERWEGELVVQGEIPLWLKGTYLRNGPGMWHIGDYNFRHLFDGYATLVKLHFEDGRLIAGHRQLESQAYQAAKKNQKICYREFSEVPKAENFLAYVGELASLFSGASLTDNANTGVVRLGDGRVVCLTETQKGSIVIDPETLETKGKFSYSDSLGGLIHSAHPIVTEEEFLTLLPDLVKPGYVVARMEKGSNERKVIGRVNCRGGPAPGWVHSFPVTQNYVVVPEMPLRYSAQNLLKAEPTPLYKFRWYPHNNAYMHVMCKATSKIVASVEVPLFVQFHFINAYEEKDEDGRVTAIIADCCEHNANTDILEKLRLNNLRSYNGEDVLPDARVGRFRIPFDGSPYGTLEAALDPNEHGRGMDMCTINPNYLGKKYRYAYACGAHRPCNFPNTITKIDFELKKAKNWYEEGTVPSEPFFVARPGAIEEDDGVVISVVSEKNGGAYALVLDGSTFQEIARAKFPYAIPYGLHGCWVPKN* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1764 562 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 14 562 - -
Ahy10g1764 562 Pfam Retinal pigment epithelial membrane protein 85 560 IPR004294 GO:0016702
Ahy10g1764 562 PANTHER BETA-CAROTENE DIOXYGENASE 14 562 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1764 Ahy-Chr10 99462868 99468278 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1764 K17913 - gmx:100794831 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2206 20 122634248 122639839 Ahy10g1764 10 99462868 99468278 hybridization