Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2177 ATGGCCGTGTCAACCACCTCCAGCGCCACCGTATGCATTCGCAGTAACATTATTATTCCAACCAACCAAACACAGAAAAGCATAATAAGTTTCACATTATTGAAACCGCGCAGATGCAGATGTTGCATCGTGAGAACTAGTTCCAACGATGTCTCTGCAGAGATCAGTGCCACAGAGCAAGTTGATGCAGAGACAGAAGAGAGTTCCATTGAAGTTCCTAAAGAATCAGAGTCTTTAATCTCTGCTCTTAACGTTGAACGTGCTCTCCGTGGCATACCAATTACAGACGCAGATCATTACGGTAGACTTGGCATTCCTAGAGATTTTCCAATTGACAAGGTTGTAGTTGCATACAAGAACAAGGTTCAGGAACTGGAGGGCCAAGGTCTAGAGGAAGACGAATTTAACAAGAAATTGGAACTTGTCAAGGAATCATTCAGGATCCTATCAACGGTAGATGAAAGAAGAATATATGATTGGAGCTTGGCCAGAGCGGAGAGTGCAGACACTTACATTTGGCCCTACGAGGTTGACAAAACTACACTCACTTCAAAAGAAGAACCTCCAGCACAGGAACCAGAGAATGTCCAACCAACGAGACTAGTTGGATACTTCATATTGGGATGGGTCGTGGTCTCATTTGTGGCATCTATTGCACTAAACTTGTAG 669 0.438 MAVSTTSSATVCIRSNIIIPTNQTQKSIISFTLLKPRRCRCCIVRTSSNDVSAEISATEQVDAETEESSIEVPKESESLISALNVERALRGIPITDADHYGRLGIPRDFPIDKVVVAYKNKVQELEGQGLEEDEFNKKLELVKESFRILSTVDERRIYDWSLARAESADTYIWPYEVDKTTLTSKEEPPAQEPENVQPTRLVGYFILGWVVVSFVASIALNL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2177 222 Gene3D DnaJ domain 84 172 IPR036869 -
Ahy20g2177 222 SUPERFAMILY Chaperone J-domain 97 163 IPR036869 -
Ahy20g2177 222 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 222 IPR044199 GO:0009535|GO:0010598
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2177 Ahy-Chr20 120651686 120653450 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2177 K23052 - gmx:100793741 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2177 20 120651686 120653450 Ahy20g2177 20 120651686 120653450 ECH
Ahy20g2177 20 120651686 120653450 Ahy10g1729 10 98251013 98252860 hybridization