Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1729 ATGGCCGTGTCAACCACCACCAGCGCCACCGGATGCATTCGCAGTAACATTATTATTGTTCCAACCAACCAAACACAGAAAAGCATAATAAGTTTCACATTATTGAAACCGCGCAGATGCAGATATTGCATCGTGAGAACTAGTTCCAACGATGTCTCTGCAGAGATCAGTGCCACAGAGCAAGTTGATGCAGAGACAGAAGAGAGTTCCATTGAAGTTCCTGAAGAATCACCGTCTTTAATCTCTGCTCTTAACGTTGAACGTGCTCTCCGTGGCATACCAATTACAGACGCAGATCATTACGGTAGACTTGGCATTCCTAGAGATTTTCCAATTGACAAGGTTGTAGTTGCATATAAGAACAAGGTTCAGGAACTGGAGGGCCAAGGTCTAGAGGAAGACGAACTTAACAAGAAATTGGAACTTGTCAAGGAATCATTCAGGATCCTATCAACGGTAGATGAAAGAAGAATATATGATTGGAGCTTGGCCAGAGCGGAGAGTGCAGACACTTACATTTGGCCCTACGAGGTTGACAAAACTACACTCACTTCAAAAGAAGAACCTCCAGCACAGGAACCAGAGAATGTCCAACCAACGAGACTAGTTGGATACTTCATATTGGGATGGATCGTGGTCTCATTTGTGGCATCTATTGCACTAAACTTGTAG 672 0.439 MAVSTTTSATGCIRSNIIIVPTNQTQKSIISFTLLKPRRCRYCIVRTSSNDVSAEISATEQVDAETEESSIEVPEESPSLISALNVERALRGIPITDADHYGRLGIPRDFPIDKVVVAYKNKVQELEGQGLEEDELNKKLELVKESFRILSTVDERRIYDWSLARAESADTYIWPYEVDKTTLTSKEEPPAQEPENVQPTRLVGYFILGWIVVSFVASIALNL* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1729 223 Coils Coil 222 223 - -
Ahy10g1729 223 SUPERFAMILY Chaperone J-domain 98 164 IPR036869 -
Ahy10g1729 223 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 223 IPR044199 GO:0009535|GO:0010598
Ahy10g1729 223 Gene3D DnaJ domain 98 165 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1729 Ahy-Chr10 98251013 98252860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1729 K23052 - gmx:100793741 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2177 20 120651686 120653450 Ahy10g1729 10 98251013 98252860 hybridization