Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1888 ATGGAAAATAGGCAAGAAAATTTGTTTCCCCCATCCTTGCCTAACCAACAACTGCTGTTCTTCGATGAGGAACTATGGCTGATGGCTGAAGAAAGGGCCCAAGAGATACTATGTACAATTCAACCAAATGTAATTTCTGAGGTGACTAGAAAGGAGATTATTGAATATGTTCGGAGGCTGATTAGAGGTTACTATGGAGCAGAGGTCTTTCCATTTGGTTCAGTCCCGCTAAAAACTTATCTTCCGGATGGAGATATTGACTTGACAGCTCTCAGTCATGAAAAGGATGAGGAGGATTTGGCTAACATGGTATGCAGTATGCTCCAAAGTAAAGGCAATTCTGAATTCCAAGTGACAGACATACAACATATACATGCAAAGGTCCAAGTTGTGAAATGCACGGTGAAAAATATTGCAGTTGACATCTCTTTCAATCAGATGGCTGGACTTTGTGCTATGCACTTTCTTGAGCAGGTTGACAAACTTGCTGGGAAAAACCATCTTTTGAAGCGCAGTATTATCTTAATCAAAGCTTGGTGCTATTATGAGAGCCGAATTCTTGGTGCACACCATGGCCTGTTATCCACATATGCAGTGGAAATATTAGTTTTGTATATTATCAATCTTTATCATTCATCATTGCGTGGTCCTCTAGAGGTGTTGTACAAATTTTTGGACTACTACAGTGCGTTTGATTGGGAAAGTAACTATGTCACAATTGATGGTTCCAAGCCCTTATCTTCACTTCCAGAAATTATTGAGACACCAGAATGTGAGCGGGTCGGTTTTTTGCTTGACAAAGAGTTTCTGAAAAATTACAGGGATACGTGCTCTATTTTAGCAAAAGAGTCCGAGACTAAAACTCATGAATTTCCCACCAAGTATATGAACATTTTGGATCCTCTAAGAAACGACAACAACCTAGGTCGTAGCGTCAGCAGAGGAAATTTGCATCGAATTAGATTTGCTCTTTCCTTTGGCGCTCGAAAGCTTAAGGAGATCCTTGCACTTCCTGGGGAAAAGATGGGTTCAGCACTAGAGAGGTTTTTCATGAACACTTTGGACAGAAATGGGAAAGGGCAAAGGCCAGATGTTGAAGTTCCTGTTCATGCATTTGGTACTGGAAGATGTGAAGAACCTGTACTCTATGGAGATTGTGAAAATTACTATGATGCCCTACAATATCTTCAGTTATACTGTAGCTCTCCCAGGCCGTTATCTGCACTTCCAAGCTCACAATCATCAGCCACTCAGGCTGACATCCATGCAGTATCGACGCAACAAAACTGGAATTTGTATTATCAAAGTGGTGCTAGTGTGTATGTACCAATACAGACAGATGTATATGCCCCAACATGTCCTGATGTTTATGTACCAATACAGAATGATGTATATGTCCCTATACAAACCGATGTATATGCCCCAGCACATACATTCTATCGACAGAATGTTCCGCACGCAACTTTCGGCCTTGAAGCAACTTTCGGCCTTGAAGAAATACGGAAATCACGAGGAACTGGCACATACATACCTGATGTGACTCATAATTCTTATTGGGATATGCGCTTAAAGGAGAACAAACCAAGGAGACATGCTCCTGTGAATCACCATAATGTGTTACCAAAATCACCTCCGAAAAAGCCACCACCGGAGGAGGTTCATTCCAAAGAAACAAACAGTAATTCAAATATTGTCAAGGTTGCAAATGAAGAATTTGCAATTCCTTCAGGCATGAGTCATAATGTATTGCCTAAATCACCTCAGGAAAAGCAGCCACCAGAGGAGGTTCATTCCAATGAGACACCTGGCGCAAACGGTAATTCAAGGCCGTTTGAGCTTGCGAAGGAAGAATTCCCTCTTCTTTCAAGCATTCACCAAAAAAGCACACCAGAAGTCCAGGAGTCTATTCATTTTACTATCTCTGAGCAGGCCAAGAATTCCCCCTTATGTCAACTCAATATCAAATTCGGAAGTTACGGGAAATCAGAACCGAGTTTGCCAACAATGGATAAGAAGGCGGATTCCAGCGCTTTGTCATCCGAGAGCACAATGATTGTTGTTCCAGGGATGGCAAAGCAGAGGAACAAAGAATGTTCTGAGAGTGATGTGAAGAGGGGCGAATAG 2124 0.4181 MENRQENLFPPSLPNQQLLFFDEELWLMAEERAQEILCTIQPNVISEVTRKEIIEYVRRLIRGYYGAEVFPFGSVPLKTYLPDGDIDLTALSHEKDEEDLANMVCSMLQSKGNSEFQVTDIQHIHAKVQVVKCTVKNIAVDISFNQMAGLCAMHFLEQVDKLAGKNHLLKRSIILIKAWCYYESRILGAHHGLLSTYAVEILVLYIINLYHSSLRGPLEVLYKFLDYYSAFDWESNYVTIDGSKPLSSLPEIIETPECERVGFLLDKEFLKNYRDTCSILAKESETKTHEFPTKYMNILDPLRNDNNLGRSVSRGNLHRIRFALSFGARKLKEILALPGEKMGSALERFFMNTLDRNGKGQRPDVEVPVHAFGTGRCEEPVLYGDCENYYDALQYLQLYCSSPRPLSALPSSQSSATQADIHAVSTQQNWNLYYQSGASVYVPIQTDVYAPTCPDVYVPIQNDVYVPIQTDVYAPAHTFYRQNVPHATFGLEATFGLEEIRKSRGTGTYIPDVTHNSYWDMRLKENKPRRHAPVNHHNVLPKSPPKKPPPEEVHSKETNSNSNIVKVANEEFAIPSGMSHNVLPKSPQEKQPPEEVHSNETPGANGNSRPFELAKEEFPLLSSIHQKSTPEVQESIHFTISEQAKNSPLCQLNIKFGSYGKSEPSLPTMDKKADSSALSSESTMIVVPGMAKQRNKECSESDVKRGE* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1888 707 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 465 701 - -
Ahy20g1888 707 Gene3D Beta Polymerase, domain 2 29 166 IPR043519 -
Ahy20g1888 707 CDD NT_PAP_TUTase 50 156 - -
Ahy20g1888 707 Gene3D - 211 336 - -
Ahy20g1888 707 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 1 452 - -
Ahy20g1888 707 MobiDBLite consensus disorder prediction 577 610 - -
Ahy20g1888 707 MobiDBLite consensus disorder prediction 528 564 - -
Ahy20g1888 707 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 465 701 - -
Ahy20g1888 707 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 452 - -
Ahy20g1888 707 SUPERFAMILY Nucleotidyltransferase 18 187 IPR043519 -
Ahy20g1888 707 MobiDBLite consensus disorder prediction 660 707 - -
Ahy20g1888 707 Pfam Nucleotidyltransferase domain 51 127 IPR002934 GO:0016779
Ahy20g1888 707 SUPERFAMILY PAP/OAS1 substrate-binding domain 168 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1888 Ahy-Chr20 104741638 104747047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1888 - - aip:107623369 1399.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1316 17 21484870 21493636 Ahy20g1888 20 104741638 104747047 ECH
Ahy20g1888 20 104741638 104747047 Ahy20g1888 20 104741638 104747047 ECH
Ahy20g1888 20 104741638 104747047 Ahy10g1467 10 83276859 83282136 hybridization