Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1316 ATGGGCGATCTTCATGTGAACGGCGTCGTTTTCGGGGAGGATCGCCCCTGCGCCTCGTCGCCGCCGTCGCCGCCGCTGCCGTTGTCAAACCCCGATCCGAGCTCCGTCGCTGCAGACGCATGGTCAGCCGCTGAGGCCACCACCTCCGCGATTCTCCGCCGGATTAGGCCGACGCTCGGTGCTGACCGGAAGCGCCGCGAGGTTGTTGATTACGTGCAGAGGCTGATTCGATATGGCGCTCGGTGTGAGGTCTTTCCATATGGGTCGGTTCCTTTAAAAACATATCTTCCAGATGGAGATATTGATTTGACTGCACTCAGTTGTCAAAATATTGAGGATGGCTTAGTGTCGGATGTTCACACTGTTCTACGAGGAGAGGAAATCAATGAAGCTGCTGAATATGAAGTGAAGGATGTTCGTTTCATTGATGCAGAGGTTAAGCTTATCAAATGCATTGTACAGAATATTGTTGTAGACATCTCTTTCAATCAATTAGGAGGACTCAGTACGTTATGTTTTCTTGAAAAGGTTGATCGACTTGTTGGCAAGGATCATCTCTTCAAACGTAGCATTATACTGATAAAAGCTTGGTGCTACTATGAGAGTCGTATTCTGGGTGCTCATCATGGCTTGATTTCAACATATGCTCTGGAAACACTTGTTCTGTATATTTTCCATCAGTTTCATGTATCCTTAGATGGTCCACTAGCGGTTCTCTATAGATTTTTGGACTACTTCAGCAAATTCGACTGGGATAATTATTGTGTTAGTTTGAAGGGACCAGTTGGAAAATCTTCTCTGCCTAATATAGTTGCTGAGGTGGCAGAAAATGGAGGAGACGCTCTGCTGACTGAGGAGTTCATCAAAACCTGTGTGGAATCATTCTCGGTACCTTCAAGGGGACCTGATTTAAATTTTCGTGCATTTCCTCAGAAACATCTTAACATCATTGATCCACTAAAGGAAAACAACAACCTTGGTCGCAGTGTCAATAAAGGTAATTTCTATCGAATACGCAGTGCTTTTAAGTATGGTGCCCGAAAGCTTGGCTGGATTCTTATGCTACCAGAAGATAGAATAGCAGATGAGCTTAATAGGTTCTTTGCGAACACATTGGATAGGCATGGATGCAATCATGGGAATGACATGCGAACTCCGAGTCTTGGTTGTAGTCCTAGAGATTTTGACTTCTCAGGAACATCAGAGGCTGCAGTGTGCTCTGAAGACAAGACATCTTTCTTTGTTTCTACCGGATCCAAAGTGGAAAGTTTACCCGGAAATCAACATAATTGTGAAACTAAAAATGAAAGAGAAAGGAATGGAGTAAAAGTTTTCTCCTCTTTGGCAGGGCCATCAGTTGACTCATCTGGGGATGAAAATGCAGATCCAATTTATAAACTAGTTGAAGATTCTAAGGATGTTGCAACAATAGGATGCTTGGATCTTGCAAGCAGTAATGATGCATCATATTTTTCAAATGGGATTGCTTCTAATGAAACAACAGTTAATTCTCTTATTGATGACGAGAAAGAGAAGCATGTTATGGAGAACAACTCTAGGTCAAATCTTGATGAAAATAGTGTGGCGTCTTATGGGCTAGTTGATTCGAGAAATGCAGTTGATGTCTTTGAAAATAATTTCCCTCATAGTGATAGTTACACTACTACTGTATCTTGGGGTACTGAAGCTACAAAATCCCTATTGGACCTGGCTGGGGATTATGAAAGTAACATTAGGAATCTACAATATGGTCAGATGTGCAATGGTTATACTGTCTCTCCTCTTGTGGTGCCTAGTCCTCCTAGGTCTCCAAAGTTACAGAATAGGAATCCTTGGGAAACTGTTAGGCAATGTCTTCAGATTAATCAAAGCATTCATTCACAGGCAAATTCAAATGGTGTTCTTGGACCAGTTTACCTTGTTAATCATGCTACTCTACCGATCCCCCCTTTTGGTTCAGAAGAGAAGAGAAAACTTCGAGGAACAGGCGCATACTTCCCTAATATGTCATCTCGTCCATATAGGGATAACAGGCCAATGTCAGGAAGGGGACGGAGCCAAGCATCTGGTGCTCATGGGCAACAACATAGACATGCACATAGTCGTAACAACGGCTTCATTCCTACTCTACAAGAGTTGAATTTGTCTGTGGAGGGAAGTTTTGAACATCCTCTTGAAGTATATCCTCCTCTTGGCAGTGCTAAGTCCAGATCATCAGAAACGTATTTCAGCCAACCTGCCATATGGGGACCACGTCATTCTAACGGTTTCCCTCACACGTCTGAAAAGCATGAGTCTGGTACTGTAAGCCCTCAGCATCGTGGACCACCAAGAATTGAAGTTAGCAATCTACATGAATCAAGCATTTCTACTACTAAGGGCTCTGCTCCCAGCACAGGGGTCGTGTCAGAGGAGAGTTCTGACTCATTATCTGCAGTTGATAACAAAAGCATTATCCTTGGTGGAGTCCATGGCCATTCAAATAGCCTTGATGATGACCCCGAGAAACAATAG 2514 0.436 MGDLHVNGVVFGEDRPCASSPPSPPLPLSNPDPSSVAADAWSAAEATTSAILRRIRPTLGADRKRREVVDYVQRLIRYGARCEVFPYGSVPLKTYLPDGDIDLTALSCQNIEDGLVSDVHTVLRGEEINEAAEYEVKDVRFIDAEVKLIKCIVQNIVVDISFNQLGGLSTLCFLEKVDRLVGKDHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHQFHVSLDGPLAVLYRFLDYFSKFDWDNYCVSLKGPVGKSSLPNIVAEVAENGGDALLTEEFIKTCVESFSVPSRGPDLNFRAFPQKHLNIIDPLKENNNLGRSVNKGNFYRIRSAFKYGARKLGWILMLPEDRIADELNRFFANTLDRHGCNHGNDMRTPSLGCSPRDFDFSGTSEAAVCSEDKTSFFVSTGSKVESLPGNQHNCETKNERERNGVKVFSSLAGPSVDSSGDENADPIYKLVEDSKDVATIGCLDLASSNDASYFSNGIASNETTVNSLIDDEKEKHVMENNSRSNLDENSVASYGLVDSRNAVDVFENNFPHSDSYTTTVSWGTEATKSLLDLAGDYESNIRNLQYGQMCNGYTVSPLVVPSPPRSPKLQNRNPWETVRQCLQINQSIHSQANSNGVLGPVYLVNHATLPIPPFGSEEKRKLRGTGAYFPNMSSRPYRDNRPMSGRGRSQASGAHGQQHRHAHSRNNGFIPTLQELNLSVEGSFEHPLEVYPPLGSAKSRSSETYFSQPAIWGPRHSNGFPHTSEKHESGTVSPQHRGPPRIEVSNLHESSISTTKGSAPSTGVVSEESSDSLSAVDNKSIILGGVHGHSNSLDDDPEKQ* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1316 837 SUPERFAMILY PAP/OAS1 substrate-binding domain 186 352 - -
Ahy17g1316 837 MobiDBLite consensus disorder prediction 783 813 - -
Ahy17g1316 837 MobiDBLite consensus disorder prediction 682 704 - -
Ahy17g1316 837 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 19 796 - -
Ahy17g1316 837 MobiDBLite consensus disorder prediction 746 813 - -
Ahy17g1316 837 MobiDBLite consensus disorder prediction 662 704 - -
Ahy17g1316 837 CDD NT_PAP_TUTase 64 168 - -
Ahy17g1316 837 Gene3D Beta Polymerase, domain 2 57 163 IPR043519 -
Ahy17g1316 837 SUPERFAMILY Nucleotidyltransferase 38 205 IPR043519 -
Ahy17g1316 837 MobiDBLite consensus disorder prediction 13 34 - -
Ahy17g1316 837 Gene3D - 164 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1316 Ahy-Chr17 21484870 21493636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1316 - - ahf:112702680 1635.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1316 17 21484870 21493636 Ahy17g1316 17 21484870 21493636 ECH
Ahy17g1316 17 21484870 21493636 Ahy20g1888 20 104741638 104747047 ECH
Ahy17g1316 17 21484870 21493636 Ahy7g1079 7 16840525 16848992 hybridization