Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1434 ATGTTCTGTTCTGTGTCCACATCTGTTGCAACTTGTTGTGTGTACTGTCAACTGTGTGTACTGTACCAATATCAAGAGGCACAGTTATTGAGCAAAGTCATGGGAAGGTTGTTTGTGATCAATCTTGAAGGGAAGATCTATAGCTGCAAACACTGCCGCACCCACCTTGCCATATCTGAAGACATCATCTCCAAGGCCTTCCATTCCAGACATGGGAAAGCTTATCTTTTCAACAAGGTTGTGAATGTTTCTGTTGGAGAAAAAGAGGAGAGGACGATGATAACTGGATTGCATACTGTGGCTGACATATTCTGTGTTGGTTGCGGATCAATCCTTGGTTGGAAATATGAGATTGCTCATGAGAAAAACCAGAAGTACAAGGAAGGAAAATCGGTGCTCGAGCGGTACAAGATATCAGGTCCTGATGGAAGTAATTATTGGATTACTCATGAAGCTCATGCTGGTGGAAGTGACGCTGATGATGCTTAA 489 0.4294 MFCSVSTSVATCCVYCQLCVLYQYQEAQLLSKVMGRLFVINLEGKIYSCKHCRTHLAISEDIISKAFHSRHGKAYLFNKVVNVSVGEKEERTMITGLHTVADIFCVGCGSILGWKYEIAHEKNQKYKEGKSVLERYKISGPDGSNYWITHEAHAGGSDADDA* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1434 162 PANTHER PROTEIN YIPPEE-LIKE 34 162 - -
Ahy20g1434 162 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 34 162 IPR039058 -
Ahy20g1434 162 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 46 139 IPR004910 -
Ahy20g1434 162 ProSiteProfiles Yippee domain profile. 45 142 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1434 Ahy-Chr20 35854510 35857594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1434 - - adu:107469509 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1434 20 35854510 35857594 Ahy20g1434 20 35854510 35857594 ECH
Ahy20g1434 20 35854510 35857594 Ahy10g1059 10 24822664 24825714 hybridization
Ahy20g1434 20 35854510 35857594 Ahy17g0936 17 11429216 11432357 PCT
Ahy20g1434 20 35854510 35857594 Ahy7g0756 7 9192339 9195482 PCT
Ahy17g0936 17 11429216 11432357 Ahy20g1434 20 35854510 35857594 PCT
Ahy7g0756 7 9192339 9195482 Ahy20g1434 20 35854510 35857594 PCT