Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0936 ATGGGGAGGGTGTTTGTGACACATCTTGAAGGGAAGTTCTACAGCTGTAAGCACTGCCGCACCCATCTAGCTCTTTGTCAAGACATCGTCTCCAAGTCTTTCCACTGCAGACATGGGAAAGCTTATCTCTTCAGTAAGGTTGTGAACGTTTCTCTTGGTGAAAACGAGGAGAGACAGATGATGACCGGGTGGCATACTGTGGCAGACATTTTCTGTGTTGGATGTGGATCGATTGTGGGTTGGAAATATGAAACTGCCCATGAAAAAACCCAGAAGTACAAGGAAGGAAAATCTGTCCTTGAACGGTACAAGGTTTCAGGTCCTGATGGCAGCAATTATTGGGTCAGCCATGAGGCACATGTTGGTGGGAGTGATGTAGATGATGCTTAG 390 0.4667 MGRVFVTHLEGKFYSCKHCRTHLALCQDIVSKSFHCRHGKAYLFSKVVNVSLGENEERQMMTGWHTVADIFCVGCGSIVGWKYETAHEKTQKYKEGKSVLERYKVSGPDGSNYWVSHEAHVGGSDVDDA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0936 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 14 106 IPR004910 -
Ahy17g0936 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Ahy17g0936 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 129 IPR039058 -
Ahy17g0936 129 PANTHER PROTEIN YIPPEE-LIKE 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0936 Ahy-Chr17 11429216 11432357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0936 - - cit:102609322 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0936 17 11429216 11432357 Ahy17g0936 17 11429216 11432357 ECH
Ahy17g0936 17 11429216 11432357 Ahy7g0756 7 9192339 9195482 hybridization
Ahy20g1434 20 35854510 35857594 Ahy17g0936 17 11429216 11432357 PCT
Ahy10g1059 10 24822664 24825714 Ahy17g0936 17 11429216 11432357 PCT
Ahy17g0936 17 11429216 11432357 Ahy20g1434 20 35854510 35857594 PCT
Ahy17g0936 17 11429216 11432357 Ahy10g1059 10 24822664 24825714 PCT