Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1355 ATGCTTCTGGGAGCTGCACCCTCTTCTTGTTTCCCTTCCTTTTCTCCCCTCAACGGTGGCGGTGACCAGCTGGTCCCTCTCTTTTCTTCTGTTTCAACGTTGACTTCTTCTTCTTCGGGGAAGAGTGGTTTGGTTGTTATGTGTGCTGCGACGAAGGGAGGCTCTAACAGCAAGCCGTTAAGCGGCGTCATTTTCGAGCCGTTTGAAGAGGTGAAGAAGGAGCTCGACCTTGTCCCTACCTTACCTCAAGCTTCCCTCGCCAGACAGAAGTTCGTCGATCAGTGTGAAGCCGCCATTAATGAACAGATCAATGTGGAGTACAATGTTTCATACGTTTACCATGCGATGTTTGCTTACTTCGATAGGGATAACGTGGCGCTGAGGGGTCTTGCCAAGTTTTTCAAGGAATCAAGTGCAGAGGAAAGGGAGCACGCTGAGAAATTGATGGAGTACCAGAATAAAAGGGGTGGAAGAGTGACGTTGCAATCTATAGTGATGCCACTCTCTGAGTTTGATCATGTGGAAAAGGGGGATGCACTTTATGCAATGGAACTTGCTCTTTCATTGGAGAAGCTAACAAACGAGAAGCTCCTTAATTTGCACAGTGTTGCCACTAAGAACAATGACGTGCAGTTGGCAGATTTCATTGAAAGCGAGTTCTTGGGTGAACAGGTGGAAGCCATTAAGAAAATATCAGAGTATGTTGCTCAGCTCAGAAGAGTTGGCAAAGGACATGGTGTGTGGCACTTTGATCAGATGCTGCTCCATGGAGATGGAGTTGCTGCTTGA 789 0.474 MLLGAAPSSCFPSFSPLNGGGDQLVPLFSSVSTLTSSSSGKSGLVVMCAATKGGSNSKPLSGVIFEPFEEVKKELDLVPTLPQASLARQKFVDQCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSAEEREHAEKLMEYQNKRGGRVTLQSIVMPLSEFDHVEKGDALYAMELALSLEKLTNEKLLNLHSVATKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHGDGVAA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1355 262 Gene3D - 58 257 IPR012347 -
Ahy20g1355 262 PANTHER FERRITIN-2, CHLOROPLASTIC 22 260 - -
Ahy20g1355 262 ProSiteProfiles Ferritin-like diiron domain profile. 89 242 IPR009040 -
Ahy20g1355 262 SUPERFAMILY Ferritin-like 83 256 IPR009078 -
Ahy20g1355 262 Pfam Ferritin-like domain 97 241 IPR008331 GO:0008199
Ahy20g1355 262 PANTHER FERRITIN 22 260 IPR001519 GO:0006826|GO:0006879|GO:0008199
Ahy20g1355 262 CDD Euk_Ferritin 93 252 - -
Ahy20g1355 262 ProSitePatterns Ferritin iron-binding regions signature 2. 209 229 IPR014034 -
Ahy20g1355 262 ProSitePatterns Ferritin iron-binding regions signature 1. 140 158 IPR014034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1355 Ahy-Chr20 29564164 29566904 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1355 K00522 - gmx:547476 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1435 17 25986212 25989681 Ahy20g1355 20 29564164 29566904 ECH
Ahy20g1355 20 29564164 29566904 Ahy20g1355 20 29564164 29566904 ECH
Ahy20g1355 20 29564164 29566904 Ahy17g0879 17 10260167 10262497 PCT
Ahy20g1355 20 29564164 29566904 Ahy7g0702 7 8045084 8047436 PCT
Ahy17g0879 17 10260167 10262497 Ahy20g1355 20 29564164 29566904 PCT
Ahy7g0702 7 8045084 8047436 Ahy20g1355 20 29564164 29566904 PCT