Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0879 ATGATTCTCAAAGCAGTTACTTCTTCTAAGCTCGTTCTCTTCGCCGTTGGTGCCGGCGAAGGCTCGCATTTCGGTCCGCCGTCGAGTCAGTTGGTTTCCTTCCGCCGCCGATTCACCGGAAACACCGGTGCCGTTGTGGTTTGCGCCACGAAAGGCGCATCCAGCAGCGGCAACAGAACCCTAACTGGAGTGGTTTTCGAACCGTTCGAAGAGGTGAAGAAGGAGCTCGAGCTAGTTCCAAATGTTCCTCAAGTCTCTTTAGCTCGCCACAAGTACGTTGATGAATCTGAAGCTGTGGTTAACGAGCAAATCAATGTGGAGTACAACGTATCATACGTTTATCATGCAATGTTTGCGTACTTCGACAGGGATAATGTCGCGCTCAGGGGTCTTGCTAAGTTTTTCAAGGAATCGAGTGACGAGGAAAGAGAGCATGCTGAGAAATTGATGAAATATCAGAACAAAAGGGGTGGAAGGGTGAAGTTGCAGCCTATAGTGATGCCGCTTTCTGAGTTTGATCATGAAGAGAAGGGAGATGCACTCCATGCAATGGAACTCGCTCTGTCGTTGGAGAAGCTTGTGAATGAGAAGCTCCTTCACTTGCACAGTGTTGCCTCCAAGAACAATGATGTTCAGTTGGCAGATTTCGTGGAAACTGAGTATTTGGGTGAACAGGTGGGAGCCATCAAAAGAATTGCTGAGTATGTCGCTCAGCTCAGAAGAGTTGGGAAAGGACATGGTGTGTGGCACTTTGATCAGATGCTTCTCCACGAGGGAGGAGCTGCATGA 789 0.4892 MILKAVTSSKLVLFAVGAGEGSHFGPPSSQLVSFRRRFTGNTGAVVVCATKGASSSGNRTLTGVVFEPFEEVKKELELVPNVPQVSLARHKYVDESEAVVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSDEEREHAEKLMKYQNKRGGRVKLQPIVMPLSEFDHEEKGDALHAMELALSLEKLVNEKLLHLHSVASKNNDVQLADFVETEYLGEQVGAIKRIAEYVAQLRRVGKGHGVWHFDQMLLHEGGAA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0879 262 CDD Euk_Ferritin 94 253 - -
Ahy17g0879 262 Pfam Ferritin-like domain 100 242 IPR008331 GO:0008199
Ahy17g0879 262 ProSiteProfiles Ferritin-like diiron domain profile. 90 243 IPR009040 -
Ahy17g0879 262 Gene3D - 58 259 IPR012347 -
Ahy17g0879 262 ProSitePatterns Ferritin iron-binding regions signature 2. 210 230 IPR014034 -
Ahy17g0879 262 SUPERFAMILY Ferritin-like 84 257 IPR009078 -
Ahy17g0879 262 PANTHER FERRITIN 38 260 IPR001519 GO:0006826|GO:0006879|GO:0008199
Ahy17g0879 262 ProSitePatterns Ferritin iron-binding regions signature 1. 141 159 IPR014034 -
Ahy17g0879 262 PANTHER FERRITIN 38 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0879 Ahy-Chr17 10260167 10262497 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0879 K00522 - gmx:100787160 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0879 17 10260167 10262497 Ahy7g0702 7 8045084 8047436 hybridization
Ahy20g1355 20 29564164 29566904 Ahy17g0879 17 10260167 10262497 PCT
Ahy17g0879 17 10260167 10262497 Ahy20g1355 20 29564164 29566904 PCT