Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy20g1330 | ATGCCTTCTTCTCTTCAACTAGATCGATTCAACTTCACCGCAACCACAACCGCAACCGCAATTATTGCTAACGGTTTAAACTGTCCTAGGCAGCCGTTAGCGGCGGTTCCACTTCCGTTATCCAGCGGCTCTGATGTCGCCTTGCATCACCACGCGCACCGGGTTGGTTCCAACCAGTGTTGTTCCGTGATGACGCAGGCGATAGAGGCGCCGGTGTCTACGGTGTGGGAGGTAGTACGGCGCTTCGACAACCCGCAGGGGTACAAGAACTTCGTGAAGAGCTGCCACGTCATCGGAGGCGAGACTCCGATGCGTGTGGGCACAGTGAGGGAGGTGCGCGTGGTGTCGGGGTTGCCGGCGGTATCAAGCACGGAGAGGCTGGAGATACTGGACGACGAGCGCCACGTCATCAGTTTCAGTGTGGTGGGTGGGGACCACCGGTTGAGGAACTACCGGTCGGTGACAACGCTACACGCCGTGGAGGGCGGCAAGGGGACGGTGGTGGTGGAGTCGTATGTGGTGGACGTGCCGCCGGGGAACACGAAGGAAGAGACTTGCGTGTTCGTCGACACCATCGTTCGTTGCAACTTGCATTCTCTCGCTCAGATCACAGAGAATCGTACTTCTGAAAAACAACGATGA | 642 | 0.5779 | MPSSLQLDRFNFTATTTATAIIANGLNCPRQPLAAVPLPLSSGSDVALHHHAHRVGSNQCCSVMTQAIEAPVSTVWEVVRRFDNPQGYKNFVKSCHVIGGETPMRVGTVREVRVVSGLPAVSSTERLEILDDERHVISFSVVGGDHRLRNYRSVTTLHAVEGGKGTVVVESYVVDVPPGNTKEETCVFVDTIVRCNLHSLAQITENRTSEKQR* | 214 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy20g1330 | 213 | SUPERFAMILY | Bet v1-like | 60 | 203 | - | - | |
| Ahy20g1330 | 213 | CDD | PYR_PYL_RCAR_like | 60 | 205 | - | - | |
| Ahy20g1330 | 213 | Gene3D | - | 39 | 213 | IPR023393 | - | |
| Ahy20g1330 | 213 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 61 | 202 | IPR019587 | - | |
| Ahy20g1330 | 213 | PANTHER | - | 34 | 209 | - | - | |
| Ahy20g1330 | 213 | PANTHER | POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER | 34 | 209 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy20g1330 | Ahy-Chr20 | 27793988 | 27795676 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy20g1330 | K14496 | - | gmx:121174020 | 293.893 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy17g0867 | 17 | 10013618 | 10015160 | Ahy20g1330 | 20 | 27793988 | 27795676 | ECH | |
| Ahy20g1330 | 20 | 27793988 | 27795676 | Ahy20g1330 | 20 | 27793988 | 27795676 | ECH | |
| Ahy20g1330 | 20 | 27793988 | 27795676 | Ahy17g0867 | 17 | 10013618 | 10015160 | PCT | |
| Ahy20g1330 | 20 | 27793988 | 27795676 | Ahy7g0695 | 7 | 7903655 | 7905127 | PCT | |
| Ahy17g0867 | 17 | 10013618 | 10015160 | Ahy20g1330 | 20 | 27793988 | 27795676 | PCT | |
| Ahy7g0695 | 7 | 7903655 | 7905127 | Ahy20g1330 | 20 | 27793988 | 27795676 | PCT |