Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0867 ATGCCTTCTCCTCTTCAACTCCACCGCTTCGATCCTTCCACCGACGCAGCAACTGCCACAGCAACAGCCATCGCCACCGGCGTCAACTTCCCCAAGGAGCATGCCTTCACGGCAACGGCAACAGCGTCTCCATCGCCGCCGTGCCTTCTCCCGGAGGCTCTAGCACGGCACCACGCGCACGGAGTTGGACCGCACCAGTGCTGCTCCTCCGTGATCCAGTCCATTGACGCTCCGGTATCCACCGTGTGGTCCGTCGTGCGCCGCTTCGACAACCCGCAGGGATACAAGAACTTCGTCAAGAGCTGCCACGTCGTCGCCTCGGGAAACGGCGGAGACGACGGAATCGGAGTCGGCGCGTTGCGCGAGGTGCGCGTGGTTTCCGGCTTGCCAGCTCAGTCAAGCACGGAACGGTTAGAGATCTTGGATGACGAGCGCCACGTCATCAGCTTCAGCGTCGTAGGCGGAGACCACCGTTTGAGGAACTACCGCTCCGTTACAACGCTTCACGGTGACGGTAACGGCGGAACGGTTGTGATTGAATCGTACGTCGTTGATGTACCGATCGGTAACACTAAAGAAGAGACTTGCGTGTTCGTTGATACGATCGTACGGTGCAACTTGCAGTCCCTCGCTCAGATCGCTGAGAACATGGCCAAAACAACCCCTCACAAATGA 675 0.5911 MPSPLQLHRFDPSTDAATATATAIATGVNFPKEHAFTATATASPSPPCLLPEALARHHAHGVGPHQCCSSVIQSIDAPVSTVWSVVRRFDNPQGYKNFVKSCHVVASGNGGDDGIGVGALREVRVVSGLPAQSSTERLEILDDERHVISFSVVGGDHRLRNYRSVTTLHGDGNGGTVVIESYVVDVPIGNTKEETCVFVDTIVRCNLQSLAQIAENMAKTTPHK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0867 224 Gene3D - 29 224 IPR023393 -
Ahy17g0867 224 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 33 222 - -
Ahy17g0867 224 CDD PYR_PYL_RCAR_like 67 215 - -
Ahy17g0867 224 PANTHER - 33 222 - -
Ahy17g0867 224 SUPERFAMILY Bet v1-like 68 213 - -
Ahy17g0867 224 Pfam Polyketide cyclase / dehydrase and lipid transport 70 215 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0867 Ahy-Chr17 10013618 10015160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0867 K14496 - gmx:100798803 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0867 17 10013618 10015160 Ahy20g1330 20 27793988 27795676 ECH
Ahy17g0867 17 10013618 10015160 Ahy17g0867 17 10013618 10015160 ECH
Ahy17g0867 17 10013618 10015160 Ahy7g0695 7 7903655 7905127 hybridization
Ahy20g1330 20 27793988 27795676 Ahy17g0867 17 10013618 10015160 PCT
Ahy17g0867 17 10013618 10015160 Ahy20g1330 20 27793988 27795676 PCT