Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1316 ATGGAGTATCCTACTATTCTCATCTTTCTGTTAGCCATGTTTGTTCTCTTAACGTCCGCATTTTCCTCAGCAAATGCCAAAATTTGTGAGCACGAGTTTGTTGTTGAAGCAACACCAGTGAAGAGGCTGTGCAAAACTCACAATAGAATAACTGTGAATGGACAATATCCTGGCCCTACTTTGGAAGTCAACAATGGAGACACTTTGGTCGTCAAAGTCACTAACAAAGCTCGCTATAATGTCACCATTCACTGGCACGGTGTTAGGCAAATGAGAACAGGGTGGGCAGATGGACCAGAATTTGTGACACAGTGTCCTATTAGACCTGGAGAGAGTTACACATACAGGTTCACAATTCAAGGACAAGAAGGTACTCTTTGGTGGCATGCTCATAGCTCATGGCTAAGGGCCACTGTTTATGGAGCTTTAATCATTCGTCCTATACAAGGACACCCCTACCCTTTCCCTAAGCCTCACCGAGAAACACCCATTCTTCTAGGGGAATGGTGGGATGCAAACCCTATCGATGTGGTGAGGCAGGCCACAAGAACAGGAGCAGCTCCTAATGTCTCTGATGCCTACACTATTAATGGTCAACCTGGTGATCTCTATAAGTGCTCTACCAAAGGGACTAGCATTGTTACAATTGATTCCGGCGAGACCAACCTCCTCCGTGTGGTAAACGCAGCACTCAACCAACCACTGTTTTTCACCGTCGCCAACCACAAGCTGACGGTGGTTGGCGCCGATGCCTCTTACCTCAGGCCATTCACCACCAAAGTCCTTATGCTGGGCCCGGGCCAAACCACCGACGTCTTGATCACCGGCGACCAGCCAGCTTCCCGGTACTACATGGCGGCGCGTGCCTACCAATCAGCACAAAACGCTGCTTTTGACAACACCACCACAACCGCCATACTCCAATACAGGAAAAGTTCTGTTATGAAACCAATCATGCCATCACTTCCTGCTTACAATGACACAAATACAGTTACTGCATTCAGCAGAAGCTTCTTCAGCCTAAGAAAAGTTGAGGTTCCTACTCAGATTGACGACAATTTGTTTTTCACCGTTGGCTTGGGACTCAACAGGTGCCCACCAAATTTTAGGAAAAATCGATGCCAAGGACCAAACGGGACAAGGTTCACTGCAAGCATAAACAATGTCTCATTTGTTCTCCCAAACAAGATTTCCATCCTTCAAGCACACCAACTTGGAATTCCGGGAGTGTTCACCACTGATTTTCCGGCACAGCCAGCCGTGAAATTCGACTACACGGGCAATGTTAGCCGTTCGTTGTGGCAGCCGATTCGAGGGACTAAGGCTTACAAGCTAAAGTATGGGTCAAGAGTGCAGATTGTAATTCAGGACACTAGCATTGTGACCCCTGAGAACCACCCTATTCATCTTCATGGCTATGATTTCTACATTGTTGCTCAAGGTTTTGGAAATTTTGATGCCAAGAAAGATACATCAAAGTTCAACCTTGTTGATCCACCTTTGAGGAACACTGTGGCTGTGCCTGTGAATGGATGGGCAGTTATTCGGTTTGTTGCTGATAATCCAGGTGCCTGGCTTATGCATTGTCACTTGGATGTTCACATTACATGGGGTTTGGCCACAATCCTCTTAGTAGAGAATGGAAATGGAGAATTGCAATCCATAGAGCCCCCTCCATTGGATCTGCCTCTCTGTTAG 1698 0.4682 MEYPTILIFLLAMFVLLTSAFSSANAKICEHEFVVEATPVKRLCKTHNRITVNGQYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGESYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIRPIQGHPYPFPKPHRETPILLGEWWDANPIDVVRQATRTGAAPNVSDAYTINGQPGDLYKCSTKGTSIVTIDSGETNLLRVVNAALNQPLFFTVANHKLTVVGADASYLRPFTTKVLMLGPGQTTDVLITGDQPASRYYMAARAYQSAQNAAFDNTTTTAILQYRKSSVMKPIMPSLPAYNDTNTVTAFSRSFFSLRKVEVPTQIDDNLFFTVGLGLNRCPPNFRKNRCQGPNGTRFTASINNVSFVLPNKISILQAHQLGIPGVFTTDFPAQPAVKFDYTGNVSRSLWQPIRGTKAYKLKYGSRVQIVIQDTSIVTPENHPIHLHGYDFYIVAQGFGNFDAKKDTSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGAWLMHCHLDVHITWGLATILLVENGNGELQSIEPPPLDLPLC* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1316 565 Pfam Multicopper oxidase 35 147 IPR011707 GO:0005507
Ahy20g1316 565 CDD CuRO_1_LCC_plant 31 147 IPR034288 GO:0005507
Ahy20g1316 565 Gene3D - 159 343 IPR008972 -
Ahy20g1316 565 Pfam Multicopper oxidase 415 547 IPR011706 GO:0005507|GO:0016491
Ahy20g1316 565 ProSitePatterns Multicopper oxidases signature 1. 523 543 IPR033138 -
Ahy20g1316 565 PANTHER MULTI-COPPER OXIDASE 7 565 IPR045087 -
Ahy20g1316 565 TIGRFAM laccase: laccase 26 565 IPR017761 GO:0046274|GO:0048046|GO:0052716
Ahy20g1316 565 SUPERFAMILY Cupredoxins 347 565 IPR008972 -
Ahy20g1316 565 CDD CuRO_2_LCC_plant 163 309 IPR034285 -
Ahy20g1316 565 PANTHER LACCASE 7 565 - -
Ahy20g1316 565 Gene3D - 16 147 IPR008972 -
Ahy20g1316 565 SUPERFAMILY Cupredoxins 155 341 IPR008972 -
Ahy20g1316 565 ProSitePatterns Multicopper oxidases signature 2. 528 539 IPR002355 GO:0005507
Ahy20g1316 565 Gene3D - 369 565 IPR008972 -
Ahy20g1316 565 SUPERFAMILY Cupredoxins 24 180 IPR008972 -
Ahy20g1316 565 Pfam Multicopper oxidase 161 311 IPR001117 -
Ahy20g1316 565 CDD CuRO_3_LCC_plant 410 548 IPR034289 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1316 Ahy-Chr20 27334679 27339907 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1316 K05909 - gmx:100808948 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1418 17 25332263 25336600 Ahy20g1316 20 27334679 27339907 ECH
Ahy20g1316 20 27334679 27339907 Ahy20g1316 20 27334679 27339907 ECH
Ahy20g1316 20 27334679 27339907 Ahy17g0864 17 9922196 9925484 PCT
Ahy20g1316 20 27334679 27339907 Ahy7g0689 7 7795418 7798440 PCT
Ahy17g0864 17 9922196 9925484 Ahy20g1316 20 27334679 27339907 PCT
Ahy7g0689 7 7795418 7798440 Ahy20g1316 20 27334679 27339907 PCT