Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1306 ATGAAGCCAAACACCCAGGCTTCTTCCTTCGCCACTACTAAACCGCCGCACGTGACCTTCTTTCGCCGCTCACGTGCTCCCGTTCAACTAAACGACGCCGTGTGGACCGTGAAATGTCATCGTATCAACTTGTCCCTTCGCCACTCCAAGACCATAACCATAACTGCAGCCGCGAAGCCCGAGAATGACGGCGTAGCTGAAAACTCGGTCGGTCCGACCCGGCGAGTCGTGTTGGCGGCGCCATTTCTTGCCGCCGGCGCGTCGTTTCTGTTCTCGTCGGCAACGAGAGCGGATGATAAGGCTGTGACGGCGCCATCTCCTGTTTCGGCGCCTCCGCCTGCAGAATTGAAGGCGGCGAAGGTTGAGGAACCGAAGAAGAAGCAGAAGGAGGAGGAGGCGATAACGTCGAGGATTTACGACGCGACGGCGATCGGGGAACCGTTGGCAATAGGGAAGGACAAGGGGAAAGTGTGGGAGAAGCTGATGAACGCGCGCGTGGTGTATTTGGGGGAAGCGGAGCAGGTTCCGGTTCGCGACGACAAGGAATTGGAGCTCGAGATCGTTAAGAATTTGCAAAAGCGGTGCATAGAGAATGAGAAGCATTTGTCTTTGGCTCTTGAAGCTTTCCCTTCGAATCTTCAGGAACCGCTCAGTCAGTTCATGGATAACAAGATAGATGGAGAAACCTTAAAGTCTTATACAATGCATTGGCCGCCTGAAAGATGGCAGGAGTATGAACCTCTTCTTAATTACTGCCGTGAAAATGGAATCCGCCTTGTTGCTTGTGGCACCCCACTATCGATCTTAAGGACTGTACAAGCAGAAGGAATTCGTGGGCTTTCAAAAGCTGATCGTAAAGTATATGCACCTCCAGCTGGTTCAGGCTTCATATCAGGCTTCACTTCTATCTCACGTAAATCATCAGTTGATAGTATTCTAAATCCATCAGTTCCTTTTGGTCCAAGCTCATATCTTTCTGCACAAGCTAGAGTTGTAGAGGAGTATAATATGTCCCAGATCATCTTACAAAATGTGCTTGATGGAGGAGCATCGGGCATGTTAGTAGTTGTGACTGGTGCAAGCCATGTAACATATGGTTCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAGGAAAAATACAGAAGAAAAACCAAGTTGTAATATTGCTTGACCCTGAAAGACAGTTCATTCGTGGAGAGGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAATAGAAATTGCTTTGACCGTGCTGAGATTGCTCGGGTTATGAATGCTGCTGGGCGCAGACGAGATGCCCTTCCACAGGATCTACAAAAGGGAATTGATCTTGGTTTGGTATCACCAGAGGTATTGCAGAACTTCTTTGACATAGAGAAGTATCCCTTAATTTCAGAACTCACTCACCGTTTCCAGGGTTTCAGGGAAAGATTGTTGGCAGACCCCAAATTCTTGCATAGATTAGCCATAGAAGAAGCTATATCGATAACAACTACTCTAATAGCACAGTATGAAAAGCGGAAAGAAAATTTTTTCCAGGAACTAGACTATGTTATCACAGACACTGTCAGAGGATCAATTGTTGATTTTTTTACAGTGTGGCTTCCTGCACCAACTCTGTCATTCCTTTCATATGCTGATGAGGCAAATGCACCTGAAAACATTAATTCACTAATAGGTCTTCTGGGCTCCATCCCAGACAATGCATTTCAAAAGAATCCAGCAGGGATAAACTGGAATCTCAATCATAGAATTGCATCAGTTGTATTTGGTGGTTTAAAACTTGCCGGTGTTGGATTTATTTCAAGCATAGGTGCTGTGGCTTCATCAAACTCTCTATATGCAATTCGTAAATTACTTAATCCGGCTGTCGTTACTCAACAACAGATTGTGAGGTCACCAATACTCAAAACAGCAGTTGTTTATTCATTATTTCTTGGAATCTCGTCAAATCTCCGATACCAGGTAATTGCTGGGTTAGTGGAGCATCGCCTTTCTGAACAGTTTGCATCCCAAACCTTGTTTGTAAATATGGTATCGTTTGTCGCACGGACAGTCAATTCCTATTGGGGAACCCAGCAATGGATTGACATTGCCCGCGCTACTGGTCTGCAAGTTAGAAAGACAGAGTTACCTACATCAGATCCTCCAAATAATGCAGCAATTGTTTGCGGCGAAACAGAAGAAGCCAGCATTGATGAGATAAAAGAATAA 2235 0.4582 MKPNTQASSFATTKPPHVTFFRRSRAPVQLNDAVWTVKCHRINLSLRHSKTITITAAAKPENDGVAENSVGPTRRVVLAAPFLAAGASFLFSSATRADDKAVTAPSPVSAPPPAELKAAKVEEPKKKQKEEEAITSRIYDATAIGEPLAIGKDKGKVWEKLMNARVVYLGEAEQVPVRDDKELELEIVKNLQKRCIENEKHLSLALEAFPSNLQEPLSQFMDNKIDGETLKSYTMHWPPERWQEYEPLLNYCRENGIRLVACGTPLSILRTVQAEGIRGLSKADRKVYAPPAGSGFISGFTSISRKSSVDSILNPSVPFGPSSYLSAQARVVEEYNMSQIILQNVLDGGASGMLVVVTGASHVTYGSRGTGVPARISGKIQKKNQVVILLDPERQFIRGEGEVPVADFLWYSAARPCNRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDIEKYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLIAQYEKRKENFFQELDYVITDTVRGSIVDFFTVWLPAPTLSFLSYADEANAPENINSLIGLLGSIPDNAFQKNPAGINWNLNHRIASVVFGGLKLAGVGFISSIGAVASSNSLYAIRKLLNPAVVTQQQIVRSPILKTAVVYSLFLGISSNLRYQVIAGLVEHRLSEQFASQTLFVNMVSFVARTVNSYWGTQQWIDIARATGLQVRKTELPTSDPPNNAAIVCGETEEASIDEIKE* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1306 744 MobiDBLite consensus disorder prediction 102 129 - -
Ahy20g1306 744 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 36 743 - -
Ahy20g1306 744 Gene3D - 123 415 - -
Ahy20g1306 744 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 36 743 - -
Ahy20g1306 744 Pfam Haem-binding uptake, Tiki superfamily, ChaN 157 376 IPR007314 -
Ahy20g1306 744 Pfam Protein RETICULATA-related 483 667 IPR021825 -
Ahy20g1306 744 SUPERFAMILY EreA/ChaN-like 155 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1306 Ahy-Chr20 26686958 26692563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1306 - - gmx:100810366 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1306 20 26686958 26692563 Ahy20g1306 20 26686958 26692563 ECH
Ahy20g1306 20 26686958 26692563 Ahy10g0966 10 18061212 18066881 hybridization