Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0966 ATGAAGCCAAACACCCAGGCTTCTTCCTTCGCCACTACTAAACCGCCGCACGTGACCTCCTTTCGCCGCTCACGTGCTCCCGTTCAACGAAACGACGCCGTGCGGACCGTGAAATGCCATCGTATCAACTTGTCCCTTCGCCACTCCAAGACCATAACCATAACTGCAGCCGCGAAGCCCGAGAATGACGGCGTAGCTGAAAACTCGGTCGGTCCGACCCGGCGAGTCGTGTTGGCGGCGCCATTTCTTGCCGCCGGCGCGTCGTTTATGTTCTCGTCAGCAACGAGGGCGGATGATAAGGCTGTGACAGCGCCATCTCCTGTTTCGGCGCCTCCGCCTGCAGAATTGACGGCGGCGAAGGTTGAGGAACCGAAGAAGAAGCAGAAAGAGGAGGAGGCGATAACGTCGAGGATTTACGACGCGACGGCGATCGGGGAACCGTTGGCAATAGGGAAGGACAAGGGGAAAGTGTGGGAGAAGCTGATGAACGCGCGCGTGGTGTATTTGGGGGAAGCGGAGCAGGTTCCGGTTCGCGACGACAAGGAATTGGAGCTCGAGATCGTTAAGAATTTGCAAAAGCGGTGCCTAGAGAATGAGAAGCGTTTGTCTTTGGCTCTTGAAGCTTTCCCTTCGAATCTTCAGGAACCGCTCAATCAGTTCATGGATAACAAGATAGATGGAGAAACCTTAAAGTCTTATACAATGCATTGGCCGCCTGAAAGATGGCAGGAGTATGAACCTCTTCTTAATTACTGTCGTGAAAATGGAATCCGCCTTGTTGCTTGCGGCACCCCACTATCGATCTTAAGGACTGTACAAGCAGAAGGAATTCGTGGACTTTCAAAAGCTGATCGTAAAGTATATGCACCTCCAGCTGGTTCAGGCTTCATATCAGGCTTCACTTCTATCTCACGTAAATCATCAGTTGATAGTATTCTAAATCCATCAGTTCCTTTTGGTCCAAGCTCATATCTTTCTGCACAAGCTAGAGTTGTAGAGGAGTATAATATGTCCCAGATCATCTTACAAAATGTGCTTGATGGAGGAGCATCGGGCATGTTAGTAGTTGTGACTGGTGCAAGCCATGTAACATATGGTTCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAGGAAAAATACAAAAGAAAAACCAAGTTGTAATATTGCTTGACCCTGAAAGACAGTTCATTCGTGGAGAGGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAATAGAAATTGCTTTGACCGTGCTGAGATTGCTCGGGTTATGAATGCTGCTGGGCGCAGACGAGATGCCCTCCCACAGGATCTACAAAAGGGAATTGATCTTGGTTTGGTATCACCAGAGGTATTGCAGAACTTCTTTGACATAGAGAAGTATCCCTTAATTTCAGAACTCACTCACCGTTTCCAGGGTTTCCGGGAAAGATTGTTGGCAGACCCCAAATTCTTGCATAGATTAGCCATAGAAGAAGCTATATCGATAACAACTACTCTAATAGCACAGTATGAAAAGCGGAAAGAAAATTTTTTCCAGGAACTAGACTATGTTATCACAGACACTGTCAGAGGATCAATTGTTGATTTTTTTACAGTGTGGCTTCCTGCACCAACTCTGTCATTCCTTTCATATGCTGATGAGGCAAATGCACCTGAAAACATTAATTCACTAATAGGTCTTCTGGGCTCCATCCCAGACAATGCATTTCAAAAGAATCCAGCAGGGACAAACTGGAATCTCAATCATAGAATTGCATCAGTTGTATTTGGTGGTTTAAAACTTGCCGGTGTTGGATTTATTTCAAGCATAGGTGCTGTGGCTTCATCAAACTCTCTATATGCAATTCGTAAATTACTTAATCCGGCTGTCGTTACTCAACAACAGATTGTGAGGTCACCAATACTCAAAACAGCGGTTGTTTATTCATTATTTCTTGGAATCTCGTCAAATCTCCGATACCAGGTAATTGCTGGGTTAGTGGAGCATCGCCTTTCTGAACAGTTTGCATCCCAAACCTTGTTTGTAAATATGGTATCGTTTGTCGCACGGACAGTCAATTCTTATTGGGGAACCCAGCAATGGATTGACATTGCCCGCGCTACTGGTCTGCAAGTTAGAAAGACAGAGTTACCTACATCAGATCCTCCAAATAATGCAGCAATTGTTTGCAGCGAAACAGAAGAAGCCAGCATTGATGAGATAAAAGAATAA 2235 0.4595 MKPNTQASSFATTKPPHVTSFRRSRAPVQRNDAVRTVKCHRINLSLRHSKTITITAAAKPENDGVAENSVGPTRRVVLAAPFLAAGASFMFSSATRADDKAVTAPSPVSAPPPAELTAAKVEEPKKKQKEEEAITSRIYDATAIGEPLAIGKDKGKVWEKLMNARVVYLGEAEQVPVRDDKELELEIVKNLQKRCLENEKRLSLALEAFPSNLQEPLNQFMDNKIDGETLKSYTMHWPPERWQEYEPLLNYCRENGIRLVACGTPLSILRTVQAEGIRGLSKADRKVYAPPAGSGFISGFTSISRKSSVDSILNPSVPFGPSSYLSAQARVVEEYNMSQIILQNVLDGGASGMLVVVTGASHVTYGSRGTGVPARISGKIQKKNQVVILLDPERQFIRGEGEVPVADFLWYSAARPCNRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDIEKYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLIAQYEKRKENFFQELDYVITDTVRGSIVDFFTVWLPAPTLSFLSYADEANAPENINSLIGLLGSIPDNAFQKNPAGTNWNLNHRIASVVFGGLKLAGVGFISSIGAVASSNSLYAIRKLLNPAVVTQQQIVRSPILKTAVVYSLFLGISSNLRYQVIAGLVEHRLSEQFASQTLFVNMVSFVARTVNSYWGTQQWIDIARATGLQVRKTELPTSDPPNNAAIVCSETEEASIDEIKE* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0966 744 Gene3D - 123 415 - -
Ahy10g0966 744 MobiDBLite consensus disorder prediction 1 19 - -
Ahy10g0966 744 Pfam Protein RETICULATA-related 483 667 IPR021825 -
Ahy10g0966 744 SUPERFAMILY EreA/ChaN-like 155 412 - -
Ahy10g0966 744 MobiDBLite consensus disorder prediction 1 32 - -
Ahy10g0966 744 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 12 743 - -
Ahy10g0966 744 Pfam Haem-binding uptake, Tiki superfamily, ChaN 157 376 IPR007314 -
Ahy10g0966 744 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 12 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0966 Ahy-Chr10 18061212 18066881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0966 - - gmx:100810366 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1306 20 26686958 26692563 Ahy10g0966 10 18061212 18066881 hybridization