Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1292 AAACCTTTTTATTCAAAACGACCTCATCCTCATTCAGTTATTCTTCATCCCCCTCCCCTATCTGAAACAGAAAAGAAAATAAGCCCAAAACCACCTTCTAGAATCCCTCGATTCACACACTTTCAGCACGAACTGGCTAACTCTCAGGAAGCCTTGTTGGTGGACGCTGCTGACTCCAGCAACATTAAGCTGGTTCGAGCATTTTATGACGCCCTAAGTGCGCGTGACTCTCACGCAGTCCTTAATCTCGTGGCTCCAGACCTCGAGTGGTGGTTCCATGGTCCACCGTCCTGCCAGTTCCTGAAGCTCTTGCTAACCGGAGAATCCTCCTCCTCCGCTTCCACCGCTGCAGACTCCTTCGAGTTTGTTCCGCTCTCCGTCGTATCCTTTGGTAGCACCGTCATCGCCGAGGGCCGCGACGCCGTGCGCTCCGTCGCCTGGGTCCACGCCTGGACAGTCACGGATGGGATAATCACCCAGGTCAGGGAGTACTTCAACACTTCCTTAACCGTTACCAAGATCGGAGACTCTGATTCCGATTCAGATTCCGGTGAATCGGAAATTGTTCCGGCGAGCTCTGACTCCGGAGGGTTCCCTTGCGTTTGGGAGAGCAGTGTCTCTGGTTTCACCGGAAAATCGGTCCCAGGTCTCGTACTGGCGATATAA 666 0.5315 KPFYSKRPHPHSVILHPPPLSETEKKISPKPPSRIPRFTHFQHELANSQEALLVDAADSSNIKLVRAFYDALSARDSHAVLNLVAPDLEWWFHGPPSCQFLKLLLTGESSSSASTAADSFEFVPLSVVSFGSTVIAEGRDAVRSVAWVHAWTVTDGIITQVREYFNTSLTVTKIGDSDSDSDSGESEIVPASSDSGGFPCVWESSVSGFTGKSVPGLVLAI* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1292 221 Gene3D - 50 175 - -
Ahy20g1292 221 SUPERFAMILY NTF2-like 60 172 IPR032710 -
Ahy20g1292 221 PANTHER SENESCENCE ASSOCIATED GENE 20 43 221 - -
Ahy20g1292 221 MobiDBLite consensus disorder prediction 1 31 - -
Ahy20g1292 221 MobiDBLite consensus disorder prediction 176 195 - -
Ahy20g1292 221 Pfam Wound-induced protein WI12 104 221 IPR009798 -
Ahy20g1292 221 PANTHER OS07G0691300 PROTEIN 43 221 IPR009798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1292 Ahy-Chr20 25791848 25792903 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1292 - - adu:110276786 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1378 17 24091918 24092403 Ahy20g1292 20 25791848 25792903 ECH
Ahy14g2036 14 115045150 115045954 Ahy20g1292 20 25791848 25792903 ECH
Ahy12g2170 12 107429887 107430703 Ahy20g1292 20 25791848 25792903 ECH
Ahy11g0311 11 3513188 3514318 Ahy20g1292 20 25791848 25792903 ECH
Ahy20g1292 20 25791848 25792903 Ahy20g1292 20 25791848 25792903 ECH