Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2170 ATGGCACCAAAAAACAAGTATGATGAAGCTTCTTGTGTTCAAAACAAATCCATAGTTGAGTCTCTATACAAGGCACTTCTTGGAGAAGGCCAAATGGAAATGGTTTCAAAGGTGCTAGCAAGTGATCTTGAATGGTGGTTCCATGGCCCCCCAGAATGCCAACACATGATGAAGGTCCTCACTGGTGAAACAGCACTCAACAAAGGCTTCAAGTTTGAGCCTAGAAGCTTCACATCCATAGGAGATTGTGTTATCACTGAAGGGTGGGAAGGACAAGCCTATTGGGTTCATGTTTGGACATTGAAGAATGGCTTGATTACTCAATTTAGGGAGTATTTCAACACATGGCTTGTTGTTAGGGATTTGAGTCCTCCAAGGTGGGAGATCAAGCAAAATAGCTTGACTCTCTGGCAGAGCCAGCCTCGCGATTTGTATCGTAGGTCACTTCCGGGGCTGGTTCTAGCCATTTAG 471 0.448 MAPKNKYDEASCVQNKSIVESLYKALLGEGQMEMVSKVLASDLEWWFHGPPECQHMMKVLTGETALNKGFKFEPRSFTSIGDCVITEGWEGQAYWVHVWTLKNGLITQFREYFNTWLVVRDLSPPRWEIKQNSLTLWQSQPRDLYRRSLPGLVLAI* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2170 156 SUPERFAMILY NTF2-like 14 122 IPR032710 -
Ahy12g2170 156 PANTHER OS07G0691300 PROTEIN 11 156 IPR009798 -
Ahy12g2170 156 PANTHER OS05G0342100 PROTEIN 11 156 - -
Ahy12g2170 156 Pfam Wound-induced protein WI12 57 156 IPR009798 -
Ahy12g2170 156 Gene3D - 4 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2170 Ahy-Chr12 107429887 107430703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2170 - - cam:101513568 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2170 12 107429887 107430703 Ahy17g1378 17 24091918 24092403 ECH
Ahy12g2170 12 107429887 107430703 Ahy20g1292 20 25791848 25792903 ECH
Ahy12g2170 12 107429887 107430703 Ahy12g2170 12 107429887 107430703 ECH
Ahy12g2170 12 107429887 107430703 Ahy11g0311 11 3513188 3514318 ECH
Ahy12g2170 12 107429887 107430703 Ahy2g1892 2 92603443 92604338 hybridization