Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1163 ATGGATATGTCCAAAAATTTTTGTTCCTTATTTAAATGTGAAATAAGAATAATACAAGTCCAAAATGTTGATTCCATAAAGTCCAAGGGGAATTTATTTGCAAGATTCTATCTTCCTTCAGGGAACAACAACAAAAGGATCCAACTTAACACTAAGAAGGTTCATTCCAAATCCTTTCCCTTTTGGAATGAGTCCTTCACTCTTGATTGTTCTTGCCCCCAAGAATTCTTGGATACACTCAAGCATGAAAGCCTTGTTTTGGAGTTGAGGCAAAGCAAGAAGATTTTGGGGTCAAATCTTGTGGGAAAAGGTGAGATTCCATGGAAGGAAATTCTTGAATCATCCCCAAACATGGTGTACAAAGAGTGGGTGAAGATGGTTCCATGCAAAGAAGAAGAACCTAAAGTTGAAGTTGAGATAAAAATACAAGTGGCTAAGAGGGAAGAGGAGAAGGAGAATAATAACAAGAGCTTCAATTTCAATTGGGATGAGTGTGGATGCAAAAATGGCCATGATCATGATCATAATGCATGGTTTAGTGCAGATGATTATGATGTATTTGCACTAGGGTTGGCTTTGGAGGCTTTTTGA 591 0.3756 MDMSKNFCSLFKCEIRIIQVQNVDSIKSKGNLFARFYLPSGNNNKRIQLNTKKVHSKSFPFWNESFTLDCSCPQEFLDTLKHESLVLELRQSKKILGSNLVGKGEIPWKEILESSPNMVYKEWVKMVPCKEEEPKVEVEIKIQVAKREEEKENNNKSFNFNWDECGCKNGHDHDHNAWFSADDYDVFALGLALEAF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1163 196 Gene3D C2 domain 2 151 IPR035892 -
Ahy20g1163 196 Pfam C2 domain 13 117 IPR000008 -
Ahy20g1163 196 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Ahy20g1163 196 PANTHER OSJNBA0006M15.15 PROTEIN 1 196 - -
Ahy20g1163 196 SMART C2_3c 12 120 IPR000008 -
Ahy20g1163 196 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 11 143 IPR035892 -
Ahy20g1163 196 Coils Coil 135 155 - -
Ahy20g1163 196 PANTHER OSJNBA0006M15.15 PROTEIN 1 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1163 Ahy-Chr20 19793233 19793978 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1163 - - ahf:112715181 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1163 20 19793233 19793978 Ahy10g0856 10 12327438 12328388 hybridization