Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0856 ATGTCATACCCATCTATGTCCAAATCCACACAACAATTGAAATCCAATCCAAACAAAGTAAACCTCATTCTCTGGCTATTTTCTAGTTTAAAACACACACACATTAAATTTCTTAACATGGGTATGTCCAAAAATTTTTGTTCCTTATTTAAATGTGAAATAAGAATAATACAAGTCCAAAATGTTGATTCCATAAAGTCCAAGGGGAATTTATTTGCAAGATTCTATCTTCCTTCAGGGAACAACAACAAAAGGATCCAACTTAACACTAAGAAGGTTCATTCCAAATCCTTTCCCTTTTGGAATGAGTCCTTCACTCTTGATTGTTCTTGCCCCCAAGAATTCTTGGACAGACTCAAGCATGAAAGCCTTGTTTTGGAGTTGAGGCAAAGCAAGAAGATTTTGGGGTCAAATCTTGTGGGAAAAGGTGAGATTCCATGGAAGGAAGTTCTTGAATCATCACCAAACATGGTGTACAAAGAGTGGGTGAAGATGGTTCCATGCAAAGAAGAAGCACCAGAAGTTGAAGTTGAGATTAAAATACAAGTGGCTAAGAGGGAAGAGGAGAAGGAGAATAATAACAAGAGCTTCAATTTCAATTGGGATGAGTGTGGATGCAAAAATGGCCATGATCATGATCATAATGCATGGTTTAGTGCAGATGATTATGATGTATTTGCACTAGGGTTGGCTTTGGAGGCTTTTTGA 708 0.3729 MSYPSMSKSTQQLKSNPNKVNLILWLFSSLKHTHIKFLNMGMSKNFCSLFKCEIRIIQVQNVDSIKSKGNLFARFYLPSGNNNKRIQLNTKKVHSKSFPFWNESFTLDCSCPQEFLDRLKHESLVLELRQSKKILGSNLVGKGEIPWKEVLESSPNMVYKEWVKMVPCKEEAPEVEVEIKIQVAKREEEKENNNKSFNFNWDECGCKNGHDHDHNAWFSADDYDVFALGLALEAF* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0856 235 PANTHER OSJNBA0006M15.15 PROTEIN 40 235 - -
Ahy10g0856 235 SMART C2_3c 51 159 IPR000008 -
Ahy10g0856 235 Gene3D C2 domain 40 190 IPR035892 -
Ahy10g0856 235 PANTHER OSJNBA0006M15.15 PROTEIN 40 235 - -
Ahy10g0856 235 ProSiteProfiles C2 domain profile. 32 163 IPR000008 -
Ahy10g0856 235 Pfam C2 domain 52 155 IPR000008 -
Ahy10g0856 235 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 50 182 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0856 Ahy-Chr10 12327438 12328388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0856 - - ahf:112715181 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1163 20 19793233 19793978 Ahy10g0856 10 12327438 12328388 hybridization