Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1079 ATGGATTTCCATAAAAGGCACTCGGTTTCCCTGCTTTCAACTTCTAGCATGCTAGATGATAATCTCATAAAGAAGCTTCTCCTCACACACGATCCAGATGGTCGTTGGTTGGATTCTGAGACTATGCTTCAGGCTGTTGGAACTGTTATGTTTCATGCTTCAACAATAGTGGCTTCTAATTTATCCTCTGCCTCCTTTCGAATTCTGAAGAACGACATAACCGAAATTGAGCAGCTTGATTGTTCCGAACCATTAGGATGCATCGTCAACAAAATTTCATACAAGATTGTCTGCAATTGCAAACGCACCGCGGACGGCGATCTCAATTCAAGGATACTGAGTTTGTTTGATTTGATTAAGGATTATAGATGGGATGCGAAAGTAGTTCTAGTCCTAGCTGCTTTCGCTGCACGATATGGCGAATTCTGGCAACTCATACAGCTTCGGCCACAGAACACTTTGGCCGATTCAATAGCGAGGATTAAGCAATTACCCTTCAATTTAAGGCCACTGCGGCCACAAATCAAGGCATTGAGCTTGTTGGTTAAGACAATGATGGATGTGGCAATGTGCATTATTGAGTTTGAATCTTTTCTACCACATCAGCATTTAGAGCTTGGAAATGAGATAGTAACTGCCACAAAGTCTCTGGTGTATGTTGCTGTTTACTGGATCATTAGAAGCAGCTTTGCATGCTTTTGTCAACTCATGGATCTCAGAACCAAGAAGAAACATGACCAAGTGTATTCAGATTCAACAATAATTGCTGCTTGGGAGCTCTCAAGTTTGACATATAGGTTAGGAAGTATATGCAACATTCTCAGAGCACAGGTGGATTTGTGTCACCAAGAAATAGAGAGAAACGTACAAGACAAGCTATTGAATCTTGCTGATGAGGTTCACATTGATAATCAGAAGGTTCTCAATTTATTGTTTCCTTCAAAGAATTACTTGCCACTGAAGGATTGCTCAAAAAACGTGAAGCTTGGTGTGACTAAACTGAAACATAAGATAGTTCTTCTTTTAATCTCAAAGCCGAAGCTACTTGCGTTTGAAGAATTACTCTTACTAGTTCAGCAAACATGTGATCATCCTTTGAATGAGAGATTCAAGGACAGTTATGAGATTGTGTGGATTCCATTTCCATCTTCTGGTACATCATGGACTGATGCTGAACAGAGTAGTCTCGAATTCTTATCGAATTCTCTGCCTTGGTATGCTGTTTGGAAGCCAAGGCTACTAAGCTCAGCTGTAGCGAAGTACATCAAAGATAAATGGAACTACAGAGATGATCCTGTAATCGTCACACTCGATTCGAATGGAACGGTTGCAAATCGCAATGCTCTTGATATGATCATGATTTGGGGCGTTCGAGCTTATCCGTTTTCAGCTTCAAAAGAGGCAGAGCTCTGGGAAGACCAGAATCTCACAATGCAACTTTTGCTAGGTGATATCAACCCTCTTCTTGCATATTGGGTTGAAAAAGGCAAAAACATTTGCATTTATGGGAGTGAAAACCTGCCATGGATCCAACAATTCAGTGACTGCATAACCAAGCTCAAACAACAAGGCCTGCAGCTAGAAACAATATATGTTGGTCATAGTAACTTCACTGAACAAATAAAAAATATAATGTCAAGTTCTACTGAGATTAATGAGAGTAGCCAACTTTCCTTTACAAAGATGCAACTCTTCTGGATTCGGTTGGCGAGTATGAGAAGATCGAAAATCAGACTAGGAAAGACACCAAGTTCTGATCAAGTTTTGGCAGAGTTATCAGCAATGCTTGACATGAATGATAAAAAGGAAGGTTGGGCAGTGATTGGAAGTTGTTGTAAAGAAGATAATATTATAAGGCTTCAAGGAATGGTTTTGATGGATTTTTTAGGGAGATTTGAGGAGTGGAGTGAAGATCTAGAAAGGTTTGGTTTGGTTGGTACTGCAAGAAAGTTCTTAGACCCTAACTTTGTTGTTGAAGGTCCTTGCAATCACTCTTACATGGTTTCATCAAGTGAAGGTTCAACTCAAGGGAGTGTTGTAACTTGTCCAGTGTGCAACTGTCCTATGAAGAAGTTTGTGGTGTATCAACCATGA 2094 0.4021 MDFHKRHSVSLLSTSSMLDDNLIKKLLLTHDPDGRWLDSETMLQAVGTVMFHASTIVASNLSSASFRILKNDITEIEQLDCSEPLGCIVNKISYKIVCNCKRTADGDLNSRILSLFDLIKDYRWDAKVVLVLAAFAARYGEFWQLIQLRPQNTLADSIARIKQLPFNLRPLRPQIKALSLLVKTMMDVAMCIIEFESFLPHQHLELGNEIVTATKSLVYVAVYWIIRSSFACFCQLMDLRTKKKHDQVYSDSTIIAAWELSSLTYRLGSICNILRAQVDLCHQEIERNVQDKLLNLADEVHIDNQKVLNLLFPSKNYLPLKDCSKNVKLGVTKLKHKIVLLLISKPKLLAFEELLLLVQQTCDHPLNERFKDSYEIVWIPFPSSGTSWTDAEQSSLEFLSNSLPWYAVWKPRLLSSAVAKYIKDKWNYRDDPVIVTLDSNGTVANRNALDMIMIWGVRAYPFSASKEAELWEDQNLTMQLLLGDINPLLAYWVEKGKNICIYGSENLPWIQQFSDCITKLKQQGLQLETIYVGHSNFTEQIKNIMSSSTEINESSQLSFTKMQLFWIRLASMRRSKIRLGKTPSSDQVLAELSAMLDMNDKKEGWAVIGSCCKEDNIIRLQGMVLMDFLGRFEEWSEDLERFGLVGTARKFLDPNFVVEGPCNHSYMVSSSEGSTQGSVVTCPVCNCPMKKFVVYQP* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1079 697 Pfam Sieve element occlusion N-terminus 19 299 IPR027942 -
Ahy20g1079 697 Pfam Sieve element occlusion C-terminus 465 696 IPR027944 -
Ahy20g1079 697 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 696 IPR039299 GO:0010088
Ahy20g1079 697 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION C 1 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1079 Ahy-Chr20 16983767 16987361 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1079 - - gmx:100819823 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1079 20 16983767 16987361 Ahy10g0780 10 9930631 9934898 hybridization
Ahy13g4061 13 140062754 140065873 Ahy20g1079 20 16983767 16987361 PCT
Ahy3g3783 3 137244345 137247460 Ahy20g1079 20 16983767 16987361 PCT