Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4061 ATGGCAATGGTGCCCAGGAAGTTGCAATCCCACTTTTTTTCAGCATCAGATGACAGTACAATGACCAAACAAATTCGTGCCACTCATGCTCCTGTTGATGATGAACGCATTGATGTTAGGCCTCTTCTTAATGTGGTTCAACACATTTTCAACTCTGCTGCTTCTATCATCCCTGGCATTGTTCAGGGAAAGCCAGCGAAATTGGATGGCTTAATGGATAGCTTCCAACAATCTGAGTTAACTGACATGCTAGATATCACCTCCCACACAATTAACAAAGTTTCATGCGAGATATCTTGCAAGTGTTTGAGTGGTGGAGATGCACATGCCACAACCATGGGGATACTAAGCATGCTGTCAAGGTATTCATGGGAGGCCAAGGTGGTGATAGCATTGGCGGCATTCGCGACCAACTTTGGCAAGTTCTGGCTTCTGGCTCAGGTTCATGCCACCAACCCTCTTGCCAGGTCTGTTGCAATGTTGAAACACATCCATGAAACGCTGGAACAAGTGAATGAATTGGGACCCAAGTTTGAAGCAATCAGCCACCTTCTCAAGGCCATGTTGGATGTAACCAACTACATTATGCAGTTCCATGAGCTTCCCTCTCAGTACATTGACCCTGAAGCACCAGAGACGCTAGCTGCCTCCAATCTTATTCCAAGTGCTGTCTATTGGACCATTCGGAGTATCATCGCCTGCGCAACACAGATTCTAGGCATCATTGGCCTCGGTCAAGGATTCATGTCATCAACAATAGAGACTTGGGAACTTTCCAGTTTGGCTCATAAGCTCAGTAACATAAACAGCCACCTTCTTAAGCAACTTGACCTCTGTCGTCAACATTTAGATGATAACAAACAACGAGAAGCATTTGAAACACTTCAGATCCTTTTTCAGACATCCCACCCTGACAACATGAAGATTCTCAAAGCCTTGATTTACAACAAGGATGATATGTTGCCATTGTTTGATGGCTCTACCAAACAACGGGTTAGCATTGAGGTGCTGCGGAAGAAAATTGTGTTACTCTACATAACAGACCTCCATCATATTTCTGATCAAGAAATCATGATCTTTGAACAAATGTATCAAGAATCACGCCAGGAATCGAGCAGGTTTGAGAGCCAATACGAATTAGTTTGGATCCCAATTGTGGATAAGGGAACCCCATGGACAGAAGAGAAACAAAACAAGTTTGTGAAGCTGCAATCTATGATGACTTGGTACTCACTCTACGACCCTTCCATGTTGGAGCCAGCAACCATCAGGTACATAAAAGAGGTGTGGCTTTTCAATAATGTCAAGCCAATAATTGTAGTTCTGGATCAGCAAGGAAAGGTTGTTAACCTGAATGCAATACACATGATGTGGATTTGGGGAAGCTTGGCTTATCCTTTCTCCAGTTCAAGGGAGGAAGCATTGTGGAAGCAAGAATCATGGCGGCTTGAACTGTTGGCAGATACAATACATCCATCTCTCTATGATTGGATAGCACAAGGCACATACATATGCTTGTACGGAGGGGACGACATAGAGTGGATTCGGAAGTTCACAAGGAAGGCACGATCACTGGCAGAAACTCTCAAGTTACCACTGGAGATGATCTATGTAGGGAGAAGCAACCCAGGAGAAAAGGTTCGAAAAATCAACACGGTCATCGAAGAAGAAAAGTTAAGCAACACACTCCCTGACCCTGGGCTCACCCTTATATGGTTCTTCTGGGTTAGGCTGGAGAGCATGTGGCACTCAAAACTGCAGCAGGAAAAAAAAGTGGAAAATGATGAGATAATGCAGGAGATAATGAGGATTCTAGGCTTTGACAGCAGTGAGCAAGGGTGGGTTGTGATGAGCAGAGGCACAGAGAATATGATGGCAAAGGGAAAGGGAGACACATTCCTGAATTGCCTCAATGACTATGATCAATGGAAGGACAAGGCAGAGGACAAGGGGGTTTTGCCTGCAATGGATGATTATATTCAAGGATTACAAACCCCACATCATTGTAATCGCTTGATACTGCCGGGAACCAATGGCAGAATCCCAGATAAGGTGGTTTGTGTCGAATGCGGCCGTCCCATGGAAAAGTTCTACATGTATCGCTGCTGCACAGACTGA 2118 0.4471 MAMVPRKLQSHFFSASDDSTMTKQIRATHAPVDDERIDVRPLLNVVQHIFNSAASIIPGIVQGKPAKLDGLMDSFQQSELTDMLDITSHTINKVSCEISCKCLSGGDAHATTMGILSMLSRYSWEAKVVIALAAFATNFGKFWLLAQVHATNPLARSVAMLKHIHETLEQVNELGPKFEAISHLLKAMLDVTNYIMQFHELPSQYIDPEAPETLAASNLIPSAVYWTIRSIIACATQILGIIGLGQGFMSSTIETWELSSLAHKLSNINSHLLKQLDLCRQHLDDNKQREAFETLQILFQTSHPDNMKILKALIYNKDDMLPLFDGSTKQRVSIEVLRKKIVLLYITDLHHISDQEIMIFEQMYQESRQESSRFESQYELVWIPIVDKGTPWTEEKQNKFVKLQSMMTWYSLYDPSMLEPATIRYIKEVWLFNNVKPIIVVLDQQGKVVNLNAIHMMWIWGSLAYPFSSSREEALWKQESWRLELLADTIHPSLYDWIAQGTYICLYGGDDIEWIRKFTRKARSLAETLKLPLEMIYVGRSNPGEKVRKINTVIEEEKLSNTLPDPGLTLIWFFWVRLESMWHSKLQQEKKVENDEIMQEIMRILGFDSSEQGWVVMSRGTENMMAKGKGDTFLNCLNDYDQWKDKAEDKGVLPAMDDYIQGLQTPHHCNRLILPGTNGRIPDKVVCVECGRPMEKFYMYRCCTD* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4061 705 Pfam Sieve element occlusion C-terminus 470 704 IPR027944 -
Ahy13g4061 705 Pfam Sieve element occlusion N-terminus 16 303 IPR027942 -
Ahy13g4061 705 PANTHER SIEVE ELEMENT OCCLUSION-RELATED 1 704 - -
Ahy13g4061 705 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 704 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4061 Ahy-Chr13 140062754 140065873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4061 - - gmx:100799626 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4061 13 140062754 140065873 Ahy13g4061 13 140062754 140065873 ECH
Ahy13g4061 13 140062754 140065873 Ahy3g3783 3 137244345 137247460 hybridization
Ahy13g4061 13 140062754 140065873 Ahy20g1079 20 16983767 16987361 PCT
Ahy13g4061 13 140062754 140065873 Ahy10g0780 10 9930631 9934898 PCT