Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0629 ATGGTTATTTCTTGGTTACACAAGATTTCATTTATTCCTCTCCTGTGTGTTTTAGGGTTAGGCATTGTGGCTGATATAACCGCCTATGCTCAAGATTCACCGCAAGACTATCTTGATGCTCACAACGCAGCAAGATCAGAGGCAGGTGTTGCCGATTTGGTTTGGGACGACGACGTTGCGGCGTTCGCCGAGAACTACGCAACGGAACGGCAAGGGGACTGCGAAATGATCCACTCCGGTGGCGGCGACGAGGGTTACGGCGAGAACATTGCATGGAGCAGTGGTGATCTTGCAGGCAGCGAAGCAGTGGGAATGTGGGTGGATGAGAAAGACAAGTATGAGTACGATTCAAACTCATGTGTTGGCGGAGAGTGCCGTCACTACACTCAAGTTGTTTGGAGTAACACTATTCGGCTTGGATGTGCCAAAGTGAATTGCGATAATGGAGGCACTTTCATTACTTGTAACTACCATCCTCCTGGAAATTATGTTCACCAAAGGCCTTACTAG 510 0.4863 MVISWLHKISFIPLLCVLGLGIVADITAYAQDSPQDYLDAHNAARSEAGVADLVWDDDVAAFAENYATERQGDCEMIHSGGGDEGYGENIAWSSGDLAGSEAVGMWVDEKDKYEYDSNSCVGGECRHYTQVVWSNTIRLGCAKVNCDNGGTFITCNYHPPGNYVHQRPY* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0629 169 PRINTS Allergen V5/Tpx-1 family signature 125 141 IPR001283 -
Ahy20g0629 169 PRINTS Allergen V5/Tpx-1 family signature 152 165 IPR001283 -
Ahy20g0629 169 PRINTS Allergen V5/Tpx-1 family signature 53 71 IPR001283 -
Ahy20g0629 169 PRINTS Allergen V5/Tpx-1 family signature 102 115 IPR001283 -
Ahy20g0629 169 ProSitePatterns CRISP family signature 2. 152 163 IPR018244 GO:0005576
Ahy20g0629 169 ProSitePatterns CRISP family signature 1. 126 136 IPR018244 GO:0005576
Ahy20g0629 169 SMART SCP_3 32 165 IPR014044 -
Ahy20g0629 169 Pfam Cysteine-rich secretory protein family 38 157 IPR014044 -
Ahy20g0629 169 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 8 169 IPR001283 -
Ahy20g0629 169 CDD CAP_PR-1 34 169 - -
Ahy20g0629 169 SUPERFAMILY PR-1-like 31 169 IPR035940 -
Ahy20g0629 169 Gene3D CAP 32 169 IPR035940 -
Ahy20g0629 169 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 8 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0629 Ahy-Chr20 6834967 6835811 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0629 K13449 - gmx:100805116 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0629 20 6834967 6835811 Ahy20g0629 20 6834967 6835811 ECH
Ahy20g0629 20 6834967 6835811 Ahy10g0422 10 4097018 4097608 hybridization