Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0422 ATGTTGGTTGCTCTCATGATTGCCCTAACCCTAGCCATAACATCACAAGTTTCATATGCCCAAAACTCACCCCAAGACTACCTCAATGCTCACAATGCAGCACGTGCCCAAGTTGGGGTTGCACCTATGTGGTGGGATTCATCCCTTGCCGGTTATGCACAAAACCATGCTAACTCACTCAGAGACCGTTGCCAATTGGTGCATTCTGGTGGTCCTTATGGTGAGAATCTTGCATGGAGCAGTGCCGATCTCACCGGCACTGCTGCCGTGAAATTGTGGGTGGACGAGAAGCAATACTATGACTATAACTCTAACACTTGTGCTTCTGGCAAGGTTTGTGGCCATTACACTCAGGTGGTTTGGCGCGACTCAGTTCGCCTTGGGTGCGCCAAGGTAAGGTGTAGCAATGGCCAAAGCACCATCATTAGCTGCAACTATGATCCACCAGGCAACTTTATTGATCAGTGGCCATATGATATTAGTCCCTTCCAAGTGCCATTAAGCTTCAATAAGAACAATAGTGGTTTGGATGAGAATTAA 540 0.4759 MLVALMIALTLAITSQVSYAQNSPQDYLNAHNAARAQVGVAPMWWDSSLAGYAQNHANSLRDRCQLVHSGGPYGENLAWSSADLTGTAAVKLWVDEKQYYDYNSNTCASGKVCGHYTQVVWRDSVRLGCAKVRCSNGQSTIISCNYDPPGNFIDQWPYDISPFQVPLSFNKNNSGLDEN* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0422 179 SMART SCP_3 22 154 IPR014044 -
Ahy10g0422 179 ProSitePatterns CRISP family signature 1. 114 124 IPR018244 GO:0005576
Ahy10g0422 179 ProSitePatterns CRISP family signature 2. 141 152 IPR018244 GO:0005576
Ahy10g0422 179 Gene3D CAP 17 162 IPR035940 -
Ahy10g0422 179 PANTHER PATHOGENESIS-RELATED PROTEIN 1 12 158 - -
Ahy10g0422 179 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 12 158 IPR001283 -
Ahy10g0422 179 PRINTS Allergen V5/Tpx-1 family signature 43 61 IPR001283 -
Ahy10g0422 179 PRINTS Allergen V5/Tpx-1 family signature 113 129 IPR001283 -
Ahy10g0422 179 PRINTS Allergen V5/Tpx-1 family signature 141 154 IPR001283 -
Ahy10g0422 179 PRINTS Allergen V5/Tpx-1 family signature 89 102 IPR001283 -
Ahy10g0422 179 SUPERFAMILY PR-1-like 18 160 IPR035940 -
Ahy10g0422 179 CDD CAP_PR-1 24 158 - -
Ahy10g0422 179 Pfam Cysteine-rich secretory protein family 28 146 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0422 Ahy-Chr10 4097018 4097608 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0422 K13449 - cpap:110825732 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0629 20 6834967 6835811 Ahy10g0422 10 4097018 4097608 hybridization