Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2667 ATGGAGGAAGTTAACGTTGTAGAAACTAAGGATGGAACTGTTTCAGTAGCTTCTGCATTTGCTGGTCACCAAGAAGCTGTGCAGGATAGGGACCATAAATTTCTAAGAAAAGCAGTTGAAGAAGCATACAAAGGAGTAGATTCTGGACATGGAGGTCCTTTTGGTGCTGTTATAGTTTGCAATGATGAAGTAGTAGCTAGTTGTCACAACATGGTTCTTAGTCATACGGACCCTACCGCACATGCAGAAGTTACAGCAATAAGGGAGGCTTGTAAGAAGCTTAAGAAGATAGAACTGTCAGATTGTGAAATATATGCTTCTTGTGAACCTTGCCCCATGTGCTTCGGTGCAATCCACCTTTCTCGAATTAAGAGGTTGGTTTATGGAGCGAAGGCCGAAGCAGCAATCGCTATTGGGTTTGATGACTTTATCGCAGATGCATTGCGAGGTACCGGATTCTATCAGAAAGCACAGCTGGAGATCAAAAGAGCTGATGGCAACGAGGCCATGATCGCGGAAGAGGTGTTCGAGAAAACGAAGGAAAAGTTCCGAATGTATTAG 561 0.4385 MEEVNVVETKDGTVSVASAFAGHQEAVQDRDHKFLRKAVEEAYKGVDSGHGGPFGAVIVCNDEVVASCHNMVLSHTDPTAHAEVTAIREACKKLKKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAQLEIKRADGNEAMIAEEVFEKTKEKFRMY* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2667 186 SUPERFAMILY Cytidine deaminase-like 24 144 IPR016193 GO:0003824
Ahy1g2667 186 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 30 129 IPR002125 -
Ahy1g2667 186 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 81 118 IPR016192 GO:0008270|GO:0016787
Ahy1g2667 186 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 185 - -
Ahy1g2667 186 CDD nucleoside_deaminase 35 142 - -
Ahy1g2667 186 Gene3D Cytidine Deaminase, domain 2 30 186 - -
Ahy1g2667 186 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 143 IPR002125 -
Ahy1g2667 186 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2667 Ahy-Chr1 105726416 105728817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2667 - - cam:101506670 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2169 11 134206139 134209416 Ahy1g2667 1 105726416 105728817 hybridization
Ahy1g2667 1 105726416 105728817 Ahy13g2443 13 56853550 56867278 PCT
Ahy13g2443 13 56853550 56867278 Ahy1g2667 1 105726416 105728817 PCT