Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1908 ATGGGATGTTCTCAATCAAGGTTGGATGATCAAGAATCAGTTCAGATTTGCAAAGATAGAAAGAGACTCATCAAACAAGCTGTTGAGCAAAGAGCACAATTTGCTTCTGGCCACATAGCATACATCCAATCCTTGAAAAGAGTCTCGGCTGCGATGCGAAATTACATTCAAGGAGACGAGCCGCACCAGTTCTCATTGGATTCATTCATAACACCTGTGAAGAAGACTAGTCCAGCCTTCATTTCCATATCATCCAAGTCCTTCACTCCAACAACAATTGAGTTCTCATCCAATTCAACTTTGAAGGTCAATTATCTAAGGCCCAGTGGCAACCCGCCAATTTTGGTTGAGGAAAGGCCTCAATCCCCCGAAATGGTTCGAGTTGAAACATATTCTCCAATGGAGCAATATGCCATGGATGATGGTTTCTTTGCCATGCAATCCTCACCTATGAACTCCTCAGCTTTTGCTTATTCTCCCAATAATAGGCCTAGTATCCCTCCCCCTTCTCCTCAAACATCTCAATGGGATTCCTTTTGGAACCCTTTTACTTCGTTAGACTATTACGGATACCCCACCAGAAGTAGCCTTGAAGAGACTATTGCAGATGATGAGGACAGAGGATTGAGGCAGGTTCGAGAAGCAGAAGGAATTCCAGACCTTGAAGAGGTTGAAACTGAAAAAGAAGATTTTGTTGGAAAGAGAAATGTTGTAGAAGAAAGAATCAGAACTGATATAAACTCCACCAAGGAAGAGGTCACGGTTGAAGACGAGGAGGAAGAGGACAGAACAAAAACTGAAATTGCACATGAAGTCAAAGAATCAAAAGGCAGTGGCAGTGAAAGATTTCAAGTATCAAAAGTTCAAACTGCAGGTCAAGTTGAATCTACAAGCCATCAGGAAGTGGCAGTTGGTAATCAAGAAGCTAAGGTAGAAACACCTGGTTTTACAGTTTATGTAAACCGAAGGCCGACAAGCATGGCAGAAGTAATCAGGGATCTTGATGTTCAATTCACAAAAGTTTGTAATGCAGCCAATGAATTTTCAGCGTTGTTAGAGGTCAATAAAGCTCAAAATTCATGGATGTCTAATGAGCTGTCAGCATCAAAATTGTTGAATCCTGTATCTCTGTTCCGGTCTTCATCATCAAGATTTTTAAAGAATAATTCTTCAAGCACTGGGGATGATGGCTGCAAGGGCCCTAGTGATCCCGTAGAGGAACAATGTATGTTTTCTGGTAGTCATCAATCAACATTGGACAGGTTATATGCTTGGGAGAAGAAGCTGTACGAGGAAGTTAGGTCTGGAGAACGTGTTCGAATTGCGTATGAGAAGAAATGTCTGCAACTCAAGAACCATGATGTGAAAGGAGAGGACCCCTCTTATGTAGATAAAACTAGAGCAGCCATTAGAGATCTACATACCCAGATAACAATTTCAATTCACTCAATTGAAGCAATCTCCAAGAGAATTGAAACTCTAAGGGATGAAGAGTTGCATCCCCAACTTCTTGAATTGCTACAAGGGCTGGCAAAGATGTGGAATGTGATGGCAGAATGTCATCAGATGCAGAAGATAACCTTGGATGAAGCTAAGATTCTTCTAACTGGCACTGATGTCAGAAAACAGTCTGGCATGTCAATAACTGATCCACATAGGCTTGCTTGTTCTGCCTCAATTCTTGAAACCGAGTTGAGGAATTGGCGAAGCACCTTCGAGTCATGGATCACTTCTCAAAGATCCTACATTCGTGCACTGGCCGGCTGGCTGCTTCGGTGTATGAGATGTGAGCCTGATGCATCAAAGTTACTATGTTCTCCTCGCAGGTCAAGTAGCACTCACCCATTGTTTGGACTGTGTGTTCAGTGGTCAAGGCGACTGGACGCCATACAAGAATCAGTGGTGCTGGACGGCATAGACTTCTTTGCAGCTGGTATAGGGTCCTTCTATGCACAACAGCTAAAAGAAGATTCTCGACAAAATGTTGGTAGATCAACGGAAACCAATGAGAGCATGGAAATGGTGGAAGCTGGACCGGTAAAAGAGGCAATGAGTACTGAGCAATTGGCTGAAATCGCTATTAGGGTACTTTGTGCTGGAATGTCAGCTGCTATGAGTTCAATGGCAGAGTTTGCTGTTGATTCTGCTGAGGGATACAATGAACTTGTTAAGCAATGGGAGAATGAGAAGTTGCAGCAGCAACAAACTTGTGTGACTGGAACGTGA 2226 0.4295 MGCSQSRLDDQESVQICKDRKRLIKQAVEQRAQFASGHIAYIQSLKRVSAAMRNYIQGDEPHQFSLDSFITPVKKTSPAFISISSKSFTPTTIEFSSNSTLKVNYLRPSGNPPILVEERPQSPEMVRVETYSPMEQYAMDDGFFAMQSSPMNSSAFAYSPNNRPSIPPPSPQTSQWDSFWNPFTSLDYYGYPTRSSLEETIADDEDRGLRQVREAEGIPDLEEVETEKEDFVGKRNVVEERIRTDINSTKEEVTVEDEEEEDRTKTEIAHEVKESKGSGSERFQVSKVQTAGQVESTSHQEVAVGNQEAKVETPGFTVYVNRRPTSMAEVIRDLDVQFTKVCNAANEFSALLEVNKAQNSWMSNELSASKLLNPVSLFRSSSSRFLKNNSSSTGDDGCKGPSDPVEEQCMFSGSHQSTLDRLYAWEKKLYEEVRSGERVRIAYEKKCLQLKNHDVKGEDPSYVDKTRAAIRDLHTQITISIHSIEAISKRIETLRDEELHPQLLELLQGLAKMWNVMAECHQMQKITLDEAKILLTGTDVRKQSGMSITDPHRLACSASILETELRNWRSTFESWITSQRSYIRALAGWLLRCMRCEPDASKLLCSPRRSSSTHPLFGLCVQWSRRLDAIQESVVLDGIDFFAAGIGSFYAQQLKEDSRQNVGRSTETNESMEMVEAGPVKEAMSTEQLAEIAIRVLCAGMSAAMSSMAEFAVDSAEGYNELVKQWENEKLQQQQTCVTGT* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1908 741 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Ahy1g1908 741 MobiDBLite consensus disorder prediction 385 404 - -
Ahy1g1908 741 Pfam Protein of unknown function (DUF632) 327 646 IPR006867 -
Ahy1g1908 741 PANTHER DUF630 FAMILY PROTEIN 1 736 - -
Ahy1g1908 741 Coils Coil 221 241 - -
Ahy1g1908 741 PANTHER UNCHARACTERIZED 1 736 - -
Ahy1g1908 741 Coils Coil 716 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1908 Ahy-Chr1 95767342 95771122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1908 1 672 Acyl Lipid Metabolism Gene Families AT2G27090 29.109 1.19e-68 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1908 - - gmx:100818631 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3065 11 148258494 148262721 Ahy1g1908 1 95767342 95771122 hybridization
Ahy1g1908 1 95767342 95771122 Ahy14g1246 14 27742643 27747036 PCT
Ahy1g1908 1 95767342 95771122 Ahy4g1150 4 29635983 29640337 PCT
Ahy14g1246 14 27742643 27747036 Ahy1g1908 1 95767342 95771122 PCT
Ahy4g1150 4 29635983 29640337 Ahy1g1908 1 95767342 95771122 PCT