Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3065 ATGGGATGTTCTCAATCAAGGTTGGATGATCAAGAATCAGTTCAGATTTGCAAAGATAGAAAGAGATTCATCAAACAAGCTGTTGAGCAAAGAGCACAATTTGCTTCTGGCCACATAGCATACATCCAATCCTTGAAAAGAGTCTCGGCTGCCATGCGAAATTACATTCAAGGAGACGAGCCGCACCAGTTCTCATTGGATTCTTTCATAACACCTGTGAAGAAGACTAGTCCAGCCTTCATTTCCATATCATCCAAGTCCTTCACTCCAACAACAATTGAGTTCTCATCCAATTCAACTTTGAAGGTCAATTATCTAAGGCCCAGTGGCAACCCGCCAATTTTGGTTGAGGAAAGGCCTCAATCCCCCGAAATGGTTCGAGTTGAAACATATTCTCCAATGGAGCAATATGCCATGGATGATGGTTTCTTTGCCATGCAATCCTCACCTATGAACTCATCAGCTTTTGCTTATTCTCCCAATAATAGGCCTAGTATTCCTCCCCCTTCTCCTCAAACATCTCAATGGGATTCCTTTTGGAACCCTTTTACATCATTAGACTATTACGGATACCCAACCAGAAGTAGCCTTGAAGAGACTATTGCGGATGATGAGGACCGAGGATTGAGGCAAGTTCGAGAAGCAGAAGGAATTCCAGACCTTGAAGAGGTTGAAACTGAAAAAGAAGATTTTGTTGGAAAGAGAAATGTTGCAGAAGAAAGAACCAGAACTGATATAAACTCCACCAAGGAAGAGGTCACGGTTGAAGACGAGGAGAAAGTGGACAGAACAAAAACTGAAATTGCACATGAGGTCAAAGAATCAAAAAAAGGCAGTGGCAGTGAAAGATTTCAAGTATCAAAAGTTCAAACTGCAGGTCAAGTTGAATCTACAAGCCATCAGGAAGTGGCAGTTGGTAATCAAGAAGCTAAGGTAGATACACCTGGTTTTACAGTTTATGTAAACCGAAGGCCGACAAGCATGGCAGAAGTAATCAGGGATCTTGATGTTCAATTCACAAAAGTTTGTAATGCAGCCAATGAATTTTCAGCGTTATTAGAGGTCAATAAAGCTCAAAATTCGTCGACGTCTAATGAGCTGTCAGCATCAAAATTGTTGAATCCCGTAGCGCTGTTCCGGTCTTCATCATCAAGATTTTTGAAGAATAATTCTTCAAGCACTGGGGATGATGGCTGCAAGGGCACTAGTGATCCCTTAGAGGAACAATGTATGTTTTCTGGTAGTCATCAATCAACATTGGACAGGTTATATGCTTGGGAGAAGAAGCTGTACGAGGAAGTTAGGTCTGGAGAACGTGTTCGAATTGCGTATGAGAAGAAATGTCTGCAACTCAAGAACCATGATGTGAAAGGAGAGGACCAATCTTATGTAGATAAAACAAGAGCAGCCATTAGAGATCTACATACCCAGATAACAATTTCAATTCACTCAATTGAAGCAATCTCCAAGAGAATTGAAACTCTAAGGGATGAAGAGTTGCATCCCCAACTTCTTGAATTGCTACAAGGGCTGGCAAAGATGTGGAATGTGATGGCAGAATGTCATCAGATGCAGAAAATAACCTTGGATGAAGCTAAGATTCTTCTAACTGGCACTGATGTCAGAAAACAGTCTGGCATGTCAATAACTGATCCACATAGGCTTGCTTGTTCTGCTTCAATTCTTGAAACTGAGTTGAGGAATTGGCGAAGCACCTTCGAGTCATGGATCACTTCTCAAAGATCCTACATTCGTGCACTTGCCGGCTGGCTGCTTCGGTGTATGAGATGCGAGCCTGATGCATCAAAGTTACTATGTTCTCCTCGCAGGTCAGGTAGCACTCACCCATTGTTTGGACTGTGTGTTCAGTGGTCAAGGCGACTGGACGCGATACAAGAATCAGTGGTGCTGGACGGCATAGACTTCTTTGCAGCTGGTATAGGGTCCTTCTATGCACAACAGCTAAAAGAAGATTCTCGACAAAATGTTGGTAGATCAACGGAAACCAATGAGAGGATGGAAATGGTGGAAGCTGGACCGGTAGAAGAGGCAATGAGTACTGAGCAATTGGCTGAAATCGCTATTAAGGTACTTTGTGCTGGAATGTCAGCTGCTATGAGTTCAATGGCAGAGTTTGCTGTTGATTCTGCTGAGGGATACAATGAACTTGTTAAGCAATGGGAGAATGAGAAGTTGCAGCAGCAACAAACTTGTGTGACTGGAACGTGA 2229 0.4275 MGCSQSRLDDQESVQICKDRKRFIKQAVEQRAQFASGHIAYIQSLKRVSAAMRNYIQGDEPHQFSLDSFITPVKKTSPAFISISSKSFTPTTIEFSSNSTLKVNYLRPSGNPPILVEERPQSPEMVRVETYSPMEQYAMDDGFFAMQSSPMNSSAFAYSPNNRPSIPPPSPQTSQWDSFWNPFTSLDYYGYPTRSSLEETIADDEDRGLRQVREAEGIPDLEEVETEKEDFVGKRNVAEERTRTDINSTKEEVTVEDEEKVDRTKTEIAHEVKESKKGSGSERFQVSKVQTAGQVESTSHQEVAVGNQEAKVDTPGFTVYVNRRPTSMAEVIRDLDVQFTKVCNAANEFSALLEVNKAQNSSTSNELSASKLLNPVALFRSSSSRFLKNNSSSTGDDGCKGTSDPLEEQCMFSGSHQSTLDRLYAWEKKLYEEVRSGERVRIAYEKKCLQLKNHDVKGEDQSYVDKTRAAIRDLHTQITISIHSIEAISKRIETLRDEELHPQLLELLQGLAKMWNVMAECHQMQKITLDEAKILLTGTDVRKQSGMSITDPHRLACSASILETELRNWRSTFESWITSQRSYIRALAGWLLRCMRCEPDASKLLCSPRRSGSTHPLFGLCVQWSRRLDAIQESVVLDGIDFFAAGIGSFYAQQLKEDSRQNVGRSTETNERMEMVEAGPVEEAMSTEQLAEIAIKVLCAGMSAAMSSMAEFAVDSAEGYNELVKQWENEKLQQQQTCVTGT* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3065 742 PANTHER DUF630 FAMILY PROTEIN 1 737 - -
Ahy11g3065 742 Coils Coil 221 241 - -
Ahy11g3065 742 Coils Coil 717 737 - -
Ahy11g3065 742 PANTHER UNCHARACTERIZED 1 737 - -
Ahy11g3065 742 Pfam Protein of unknown function (DUF632) 328 647 IPR006867 -
Ahy11g3065 742 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3065 Ahy-Chr11 148258494 148262721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g3065 1 723 Acyl Lipid Metabolism Gene Families AT2G27090 26.459 2.41e-71 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3065 - - gmx:100818631 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3065 11 148258494 148262721 Ahy1g1908 1 95767342 95771122 hybridization
Ahy11g3065 11 148258494 148262721 Ahy14g1246 14 27742643 27747036 PCT
Ahy11g3065 11 148258494 148262721 Ahy4g1150 4 29635983 29640337 PCT
Ahy14g1246 14 27742643 27747036 Ahy11g3065 11 148258494 148262721 PCT
Ahy4g1150 4 29635983 29640337 Ahy11g3065 11 148258494 148262721 PCT