Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1877 ATGATCACGGGTAAGGATATTTACGATGTGTTTGCAGCTATTGTGCCACTCTATGTGGCTATGATCTTAGCATATGGTTCTGTTCGGTGGTGGAAGATCTTCACGCCGGACCAATGCTCCGGGATTAACCGCTTCGTTGCGGTCTTTGCAGTTCCACTCCTCTCTTTCCACTTCATCTCCTCCAATGACCCTTACGCCATGAACTACCACTTCATAGCAGCCGATTCTCTTCAGAAGCTTGTCATCTTGGCTGCGCTTTTTCTATGGAACACCTTCACAAAACACGGTACCTTGGATTGGACAATCACCCTCTTCTCACTCTCCACTCTCCCAAACACACTCGTCATGGGAATCCCTCTCCTCAAGGCCATGTACGGCGACTTCTCCGGCACCCTCATGGTCCAAATCGTTGTCTTGCAGAGCGTTATATGGTACACTCTCATGCTCTTCATGTTCGAATACAGGGGTGCTAAGCTTCTTATCTCCGAGCAGTTCCCGGAGACTGCAGGCTCCATCACCTCCTTCAGGGTTGACTCCGATGTGGTGTCCCTCAACGGCAGGGATCCACTGCAAGCGGATGCAGAGATTGGTGAAGATGGAAAGCTTCATGTTGTGGTGAAGAGATCAGGTGCTTCCTCCATGATATCTTCCTTCAACAAGTCTCATTTAACTTCCATGACTCCTCGCGCTTCCAATCTCACCGGTGTTGAGATCTATTCCGTTCAATCATCCAGGGAACCAACACCCAGAGCTTCCAGTTTCAATCAAACGGACTTCTTCGCCATGTTTAATGCAAGCAAAGCACCCAGTCCCAAACACGGTTACACCAATGGCGAGTACTCCAAAGGAGCGACTCCGAGGACATCGAATTTTGAAGAGGAGATAACGATGAAGATGCATAATAAGAAAAGAGGAGCGAGGAGCATGAGTGGCGAACTGTTCAACTCTTCTTATCCGCCTCCGAACCCTATGTTTTCAGGATCTACAAGCGGCTTAAAGAAGAAAGATGGCGGCGGCAGCGGAACTACTCCTCCTAACAACAAGGAGTTGCACATGTTTGTATGGAGTTCAAGCGCTTCCCCAGTCTCTGAGGGGAATCTCAGACAAGCTGTTCATAGTGCTGCATCTACTGATTTTGATAAGGCGGTTACACCAGAGACTCTTGCCTCCAAAGCTGTGCAAGAGTTGATTGAGAACATGAGTCCAGCACGTAGAGAGGCGGAGATTGAGGAAGGAGGAGGGAAGAAGGTGGTGGAGATGGAAGAAGGAGATGCAAAGAAGAAGCAACACATGCCGCCGGCAAGTGTGATGACAAGGCTCATCCTCATCATGGTTTGGAGGAAACTGATTAGAAATCCAAATACTTATTCAAGCCTTTTGGGACTCACATGGTCTCTCATATCATTTAGATTTCACATAGAAATGCCGAGTATTGTAAAAGGATCCATATCTATACTCTCTGATGCAGGTCTTGGAATGGCCATGTTCAGTCTAGGTCTGTTCATGGCATTGCAGCCGAAGATAATTGCATGTGGAAAATCTGTTGCGGCGTTTTCTATGGCAGTTAGGTTCTTGACAGGTCCAGCTGTGATTGCTGCTACCTCCATTGGCATTGGTATTCGAGGAGTTCTACTGCATGTTGCAATTGTTCAGGCTGCACTTCCCCAGGGTATTGTTCCCTTTGTGTTCGCCAAAGAATACAATCTCCACGCGGATATACTCAGCACTGCGGTTATATTTGGAATGCTGGTAGCATTGCCCATAACAATTCTTTACTACGTGCTCCTTGGACTCTAA 1797 0.4763 MITGKDIYDVFAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFIAADSLQKLVILAALFLWNTFTKHGTLDWTITLFSLSTLPNTLVMGIPLLKAMYGDFSGTLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISEQFPETAGSITSFRVDSDVVSLNGRDPLQADAEIGEDGKLHVVVKRSGASSMISSFNKSHLTSMTPRASNLTGVEIYSVQSSREPTPRASSFNQTDFFAMFNASKAPSPKHGYTNGEYSKGATPRTSNFEEEITMKMHNKKRGARSMSGELFNSSYPPPNPMFSGSTSGLKKKDGGGSGTTPPNNKELHMFVWSSSASPVSEGNLRQAVHSAASTDFDKAVTPETLASKAVQELIENMSPARREAEIEEGGGKKVVEMEEGDAKKKQHMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLTWSLISFRFHIEMPSIVKGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAAFSMAVRFLTGPAVIAATSIGIGIRGVLLHVAIVQAALPQGIVPFVFAKEYNLHADILSTAVIFGMLVALPITILYYVLLGL* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1877 598 MobiDBLite consensus disorder prediction 315 345 - -
Ahy1g1877 598 TIGRFAM 2a69: auxin efflux carrier 1 598 IPR014024 -
Ahy1g1877 598 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 598 IPR033526 GO:0010315|GO:0010329
Ahy1g1877 598 Pfam Membrane transport protein 10 593 IPR004776 GO:0016021|GO:0055085
Ahy1g1877 598 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1877 Ahy-Chr1 95315902 95318617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1877 102 598 Organic Solute Cotransporters AT5G57090 71.245 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1877 K13947 - gmx:100305383 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3093 11 148581441 148584696 Ahy1g1877 1 95315902 95318617 hybridization
Ahy1g1877 1 95315902 95318617 Ahy13g2155 13 41032497 41036263 PCT
Ahy1g1877 1 95315902 95318617 Ahy3g1853 3 38994339 38998376 PCT
Ahy13g2155 13 41032497 41036263 Ahy1g1877 1 95315902 95318617 PCT
Ahy3g1853 3 38994339 38998376 Ahy1g1877 1 95315902 95318617 PCT