Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1705 ATGATGGAGCTCCACAGGTTCAGCAGCACAGGTTCTTCATCTGATTACTCCAACCACCATAACCAAACCTCTTTATCCTCACAACCCAGCTTGGCTTCAGTACCCTCTCTTAACAAGAACTATCATTATTCTTGTTCTAATTATTCAACCGCCTCATACAACTGCATCGCAACCCTAAAAGGACACAACTACTACACATCCTCCTTAACCCTCTCCGCTAAATTCCTCTACAGTGGCTCCTCCGACAGAGAAATTAGGTCATGGTCCAAACAATCATTATTAACTACCACTAATAATATAGTCCTTGCTGGGAAAGGTGCAGTCAAGTCTCTAGTTGTTCACTCAGACAAGCTCTTTAGTGCTCACCAAGATAACAAAATTAGGGTTTGGAAGATCACCAACAATATCAACAACCACCACGACCATGAGCAGAAGTACACGCGTTTGGCCACGCTTCCAACGCTCAGCGACCGCGTCTCCAAGATATTACTCCCCAAAAACCACGTTAGAATCCGGAGGCACAAAAAGTCCACGTGGGTTCACCACGTGGATGCAGTGTCTTGTCTTGCCCTATCCCATGACGGAGCCTTGTTATACTCTGCCTCGTGGGACAGGACGATCAAGATTTGGCGAACCAGAGACTTTGCGTGTTTGGAATCAGTGATAAATGCACACGATGATGCCATCAACGCAGTTGCAGTTTCCAACGATGGACGCGTCTACACAGGATCGGCGGACAAAAGAATCAAGGTTTGGAAGAAGAAAGGCGGCGGCCAAGGAGTAGTGGGAGAGAAAAGCAAAAGCAAAAACAAACACTACCTTGTGGACACGTTGGAGAAACACAAGTCTGGGATCAACGCTTTGGCGCTTAACGGCGACGGTTCGTTACTATATTCCGGGGCATGTGATAGATCAATACTGTTATGGGCGAAGAAGGAAGAAGACAAAGAAGGAGAAGGTGGTGATGGAAAAATGGTGGTGGTGGGTGCGCTTAGGGGGCATGGTAAGTCTATACTTTGCTTAGTGGTGGTGATGGATTTTGTTGTGAGTGGTTCAGAGGACAAAACGATTCGTGTTTGGAGGGGTTTTGGCGGGAGAGAGTATACTTGTGTGGCGGTTTTGGAAGGGCATAGAGGACCAATTAAGAGCCTAACCGCCATGGTTGATCATAACCATGATGATCCTTCCCAAGCATCGATGGTTGTCTATAGTGGCAGTTTGGACTGTGACATTAAGGTTTGGAAGGTTTTTGTTCCTCTTCCCTGA 1266 0.4668 MMELHRFSSTGSSSDYSNHHNQTSLSSQPSLASVPSLNKNYHYSCSNYSTASYNCIATLKGHNYYTSSLTLSAKFLYSGSSDREIRSWSKQSLLTTTNNIVLAGKGAVKSLVVHSDKLFSAHQDNKIRVWKITNNINNHHDHEQKYTRLATLPTLSDRVSKILLPKNHVRIRRHKKSTWVHHVDAVSCLALSHDGALLYSASWDRTIKIWRTRDFACLESVINAHDDAINAVAVSNDGRVYTGSADKRIKVWKKKGGGQGVVGEKSKSKNKHYLVDTLEKHKSGINALALNGDGSLLYSGACDRSILLWAKKEEDKEGEGGDGKMVVVGALRGHGKSILCLVVVMDFVVSGSEDKTIRVWRGFGGREYTCVAVLEGHRGPIKSLTAMVDHNHDDPSQASMVVYSGSLDCDIKVWKVFVPLP* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1705 421 Pfam WD domain, G-beta repeat 179 210 IPR001680 GO:0005515
Ahy1g1705 421 Pfam WD domain, G-beta repeat 369 415 IPR001680 GO:0005515
Ahy1g1705 421 Pfam WD domain, G-beta repeat 329 360 IPR001680 GO:0005515
Ahy1g1705 421 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Ahy1g1705 421 Pfam WD domain, G-beta repeat 222 253 IPR001680 GO:0005515
Ahy1g1705 421 Pfam WD domain, G-beta repeat 275 309 IPR001680 GO:0005515
Ahy1g1705 421 SUPERFAMILY WD40 repeat-like 52 416 IPR036322 GO:0005515
Ahy1g1705 421 PANTHER SIMILARITY TO GTP-BINDING REGULATORY PROTEIN AND WD-REPEAT PROTEIN 9 419 - -
Ahy1g1705 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 222 253 IPR001680 GO:0005515
Ahy1g1705 421 PRINTS G protein beta WD-40 repeat signature 240 254 IPR020472 -
Ahy1g1705 421 PRINTS G protein beta WD-40 repeat signature 198 212 IPR020472 -
Ahy1g1705 421 PRINTS G protein beta WD-40 repeat signature 348 362 IPR020472 -
Ahy1g1705 421 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 179 210 - -
Ahy1g1705 421 Gene3D - 168 418 IPR015943 GO:0005515
Ahy1g1705 421 CDD WD40 55 415 - -
Ahy1g1705 421 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 278 309 - -
Ahy1g1705 421 SMART WD40_4 215 253 IPR001680 GO:0005515
Ahy1g1705 421 SMART WD40_4 95 131 IPR001680 GO:0005515
Ahy1g1705 421 SMART WD40_4 52 89 IPR001680 GO:0005515
Ahy1g1705 421 SMART WD40_4 324 361 IPR001680 GO:0005515
Ahy1g1705 421 SMART WD40_4 367 415 IPR001680 GO:0005515
Ahy1g1705 421 SMART WD40_4 172 211 IPR001680 GO:0005515
Ahy1g1705 421 SMART WD40_4 271 310 IPR001680 GO:0005515
Ahy1g1705 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 179 220 IPR001680 GO:0005515
Ahy1g1705 421 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 9 419 IPR045182 -
Ahy1g1705 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 278 309 IPR001680 GO:0005515
Ahy1g1705 421 MobiDBLite consensus disorder prediction 1 31 - -
Ahy1g1705 421 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 331 360 - -
Ahy1g1705 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 331 360 IPR001680 GO:0005515
Ahy1g1705 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 59 89 IPR001680 GO:0005515
Ahy1g1705 421 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 222 253 - -
Ahy1g1705 421 Gene3D - 9 167 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1705 Ahy-Chr1 90298701 90300864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1705 218 415 Acyl Lipid Metabolism Gene Families AT3G18860 25.490 7.53e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1705 - - ahf:112722395 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1787 11 114658010 114659722 Ahy1g1705 1 90298701 90300864 hybridization