Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1319 ATGAGCAACGGGAAACTTTTTAGCATCGAATCTTTCGAGCTCAAGTTCCCCTTTGAGTTGAAGAAGCAGATCTCGTGCGCTCTCCAATTGTTCAATAAGACTGATAGCTATGTAGCTTTCAAGGTGAAAACAACTAATCCGAAGAAGTATTGTGTTCGTCCAAACACAGGAATTGTCTTGCCACGATCAACATGTGATATTATGGTTGCCATGCAGGCGCAAAAGGAAGCGCCACCTGATATGCAATGCAAGGATAAATTTCTTCTTCAGAGTGTGAAAACTTTTGACGGTGCTTCTACAAAAGATATCAATTCAGAAATGTTCAACAAAGAGGCAGGGCATTTGGTTGAGGAGTGTAAATTGAGAGTGGTGTATGTTTCTCCACCTCAACCACCATCTCCAGTCCCAGAAGGTTCCGAGGAAGGGTCATCGCCTAAAGGTTCTGTTTCAGAAAATGGGAATGTCAGTAGTGTTGACTTCACACAAGCATCAAGAGAATTTACTGAAAGATCCGATACTCAAGACAAATATGCAGAGGGAAGGGCTCTTATCACAAGATTGACTGAAGAAAAAAGTAATGCAATTCAACAGAACAACAAGTTCCATCAGGAACCGGATCTTCTGAAGCGTGAAGGCAATAAAAATCGCAGTGGAGTCTCCTTTATCATTATTGTATTAATTGGCTTACTTGGCATGATTATGGGGTATCTCATGAGGAAGACCTAA 726 0.4132 MSNGKLFSIESFELKFPFELKKQISCALQLFNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIMVAMQAQKEAPPDMQCKDKFLLQSVKTFDGASTKDINSEMFNKEAGHLVEECKLRVVYVSPPQPPSPVPEGSEEGSSPKGSVSENGNVSSVDFTQASREFTERSDTQDKYAEGRALITRLTEEKSNAIQQNNKFHQEPDLLKREGNKNRSGVSFIIIVLIGLLGMIMGYLMRKT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1319 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Ahy1g1319 241 Coils Coil 184 204 - -
Ahy1g1319 241 SUPERFAMILY PapD-like 3 141 IPR008962 -
Ahy1g1319 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Ahy1g1319 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 5 126 IPR000535 -
Ahy1g1319 241 MobiDBLite consensus disorder prediction 143 164 - -
Ahy1g1319 241 MobiDBLite consensus disorder prediction 127 175 - -
Ahy1g1319 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 238 IPR016763 GO:0005789
Ahy1g1319 241 Pfam MSP (Major sperm protein) domain 13 110 IPR000535 -
Ahy1g1319 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1319 Ahy-Chr1 39709495 39718363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1319 - - gmx:100527687 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1344 11 48079791 48088391 Ahy1g1319 1 39709495 39718363 hybridization
Ahy1g1319 1 39709495 39718363 Ahy5g0435 5 5096084 5099893 PCT