Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1344 ATGAGCAACGGGGAGCTTTTTAGCATCGAACCTCTCGAGCTCAGGTTCCCCTTTGAGTTGAAGAAGCAGATCTCGTGCGCTCTCCAATTGTTCAATAAGACCGATAGCTATGTAGCTTTCAAGGTGAAAACAACTAATCCGAAGAAGTATTGTGTTCGTCCAAACACAGGAATTGTCTTGCCACGATCAACATGTGATATCATGGTTGCCATGCAGGCGCAAAAGGAAGCGCCACCTGATATGCAATGCAAGGATAAATTTCTTCTTCAGAGTGTGAAAACTTTTGACGGTGCTTCTACAAAAGATATCAATTCAGAAATGTTCAACAAGGAGGCAGGGCATTTGGTTGAGGAGTGTAAATTGAGAGTGGTGTATGTTTCTCCACCTCAACCACCATCTCCAGTCCCAGAAGGTTCTGAGGAAGGGTCATCGCCTAGAGGTTCTGTTTCAGAAAATGGGAATGTCAGTAGTGTTGACTTCACACAAGCATCAAGAGGATTTACTGAAAGATCCGATACTCAATACAAATATGCAGAGGCAAGGGCTCTTATCACAAGATTGACTGAAGAAAAAAGTAATGCAATTCAACAGAACAACGAGTGCCATCAGGAACCGATGGATAGCATTCTGGAAGTAGAAAACATTGGGGAATGTCAGGTATGA 663 0.4314 MSNGELFSIEPLELRFPFELKKQISCALQLFNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIMVAMQAQKEAPPDMQCKDKFLLQSVKTFDGASTKDINSEMFNKEAGHLVEECKLRVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNVSSVDFTQASRGFTERSDTQYKYAEARALITRLTEEKSNAIQQNNECHQEPMDSILEVENIGECQV* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1344 220 Coils Coil 177 204 - -
Ahy11g1344 220 Gene3D Immunoglobulins 2 130 IPR013783 -
Ahy11g1344 220 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Ahy11g1344 220 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 204 - -
Ahy11g1344 220 MobiDBLite consensus disorder prediction 127 166 - -
Ahy11g1344 220 PIRSF VAMP_assoc_prot 1 214 IPR016763 GO:0005789
Ahy11g1344 220 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 204 IPR016763 GO:0005789
Ahy11g1344 220 SUPERFAMILY PapD-like 2 141 IPR008962 -
Ahy11g1344 220 MobiDBLite consensus disorder prediction 143 166 - -
Ahy11g1344 220 Pfam MSP (Major sperm protein) domain 8 110 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1344 Ahy-Chr11 48079791 48088391 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1344 - - gmx:100527687 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1344 11 48079791 48088391 Ahy1g1319 1 39709495 39718363 hybridization
Ahy11g1344 11 48079791 48088391 Ahy5g0435 5 5096084 5099893 PCT