Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1245 ATGGAGATTGCTGCCACCGCAGCTTCCACCTTCTCCCTCAACAGACCCACCCTCCCCTTTCCATCTTCTTCTAGAATCCATCCCCCCATCAGAGCCCTCAACTCCTCTTCCTCCGCAGCCCTCAGAGCCTCTCTCTCTACCAATTTTGTTGCCCCTTTCGCCACCTCCGCCAGCAGCGCCTCCAGCCCCTTCGCCGGCCACAAGCTACGCCCTTCTTCTCTCAATCCGGCGTCGTTTCGTGGCACCAAGGGTAAACGAGGCGTCGTTACTATGGTTATTCCGTTCTCTAGAGGAAGTGCATGGGAGCAACCTCCACCAGACTTAGCTTCCTACTTATACAAAAATCGAATTGTTTATTTGGGCATGTCTCTTGTTCCATCCGTTACAGAGTTAATACTAGCTGAATTTCTTTACCTTCAGTATGAAGATGAGCAAAAGCCTATTTACCTATACATAAACTCCACTGGGACAACTAAGGGAGGTGAGAAGTTGGGTTATGAGACCGAAGCATTTGCAATTTATGATGTGATGAGGTATGTCAAGCCTCCTATATTTACCCTTTGTGTTGGTAATGCTTGGGGAGAAGCAGCTTTGCTTTTGGCTTCTGGTGCAAAGGGAAACCGTTCTGCTTTGCCATCATCAACAATAATGATAAGACAGCCAATAGCAAGGTTTCAAGGACAAGCAACGGACGTTAACCTTGCAAGAAAAGAAGTCAATAATGTGAAGACAGAATTGGTTAAATTATATGCAAAGCATATTGAAAAAACACCTGAGCAGATTGAAGCTGATATTCAGCGCCCAAAGTATTTTAGTCCAAGTGAAGCTGTCGAATATGGTATCATAGATAAGGTATTATACAATGATAGAAGCACCGAGGATCATGGAGTTGTTTCTGACCTCAAAAAGGCACAGCTTATTTAG 924 0.4524 MEIAATAASTFSLNRPTLPFPSSSRIHPPIRALNSSSSAALRASLSTNFVAPFATSASSASSPFAGHKLRPSSLNPASFRGTKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEQKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARKEVNNVKTELVKLYAKHIEKTPEQIEADIQRPKYFSPSEAVEYGIIDKVLYNDRSTEDHGVVSDLKKAQLI* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1245 307 Gene3D - 80 293 - -
Ahy1g1245 307 PRINTS Clp protease catalytic subunit P signature 147 167 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy1g1245 307 PRINTS Clp protease catalytic subunit P signature 186 203 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy1g1245 307 PRINTS Clp protease catalytic subunit P signature 207 226 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy1g1245 307 PRINTS Clp protease catalytic subunit P signature 264 283 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy1g1245 307 PRINTS Clp protease catalytic subunit P signature 107 122 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy1g1245 307 Coils Coil 232 252 - -
Ahy1g1245 307 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 20 306 - -
Ahy1g1245 307 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 20 306 IPR023562 -
Ahy1g1245 307 CDD S14_ClpP_2 107 285 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy1g1245 307 SUPERFAMILY ClpP/crotonase 102 289 IPR029045 -
Ahy1g1245 307 Pfam Clp protease 107 287 IPR023562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1245 Ahy-Chr1 34866910 34875447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1245 K01358 - gmx:100780029 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1257 11 41788194 41794744 Ahy1g1245 1 34866910 34875447 hybridization