Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1257 ATGGAGATTGCTGCTACCGCAGCTTCCACCTTCTCCCTCAACAGACCGACACTCCCCTTTCCATCTTCTTCTAGAATCCGTCCCCCCATCAGAGCCCTCAACTCCTCTTCCTCCTCCGCCTCTTCCCCCGCAGCCCTCAGAGCCTCTCTCTCTACCAATTTTGTTGCCCCTTTCGCCACCTCCGCCAGCAGCGCCTCCAGCCCCTTCGCCGGCCACAAGCTACGCCCTTCTTCTCTCAATCCGGCGTCGTTTCGTGGCATCAAGGGTAAACGAGGCGTCGTTACTATGGTTATTCCTTTCTCTAGAGGAAGTGCATGGGAGCAACCTCCACCAGATTTAGCTTCCTACTTATACAAAAATCGAATTGTTTATTTGGGCATGTCTCTTGTTCCATCCGTTACAGAGTTAATACTAGCTGAATTTCTTTACCTTCAGTATGAAGATGAGCAAAAGCCTATTTACCTATACATAAACTCCACTGGGACAACTAAGGGAGGTGAGAAGTTGGGTTATGAGACCGAAGCATTTGCAATTTATGATGTGATGAGGTATGTCAAGCCTCCTATATTTACCCTTTGTGTTGGTAATGCTTGGGGAGAAGCAGCTTTGCTTTTGGCTTCTGGTGCAAAGGGAAACCGTTCTGCTTTGCCATCATCAACAATAATGATAAGACAGCCAATAGCAAGGTTTCAAGGACAAGCAACGGATGTTAACCTTGCAAGAAAAGAAGTCAATAATGTGAAGACAGAATTGGTTAAATTATATGCAAAGCATATTGAAAAAACACCTGAGCAGATTGAAGCTGATATTCAGCGCCCAAAGTATTTTAGTCCAAGTGAAGCTGTTGAATATGGTATCATAGATAAGGTATTATACAATGATAGAAGCACCGAGGATCATGGAGTTGTTTCTGACCTCAAAAAGGCACAGCTTATTTAG 939 0.4505 MEIAATAASTFSLNRPTLPFPSSSRIRPPIRALNSSSSSASSPAALRASLSTNFVAPFATSASSASSPFAGHKLRPSSLNPASFRGIKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEQKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARKEVNNVKTELVKLYAKHIEKTPEQIEADIQRPKYFSPSEAVEYGIIDKVLYNDRSTEDHGVVSDLKKAQLI* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1257 312 SUPERFAMILY ClpP/crotonase 107 294 IPR029045 -
Ahy11g1257 312 PRINTS Clp protease catalytic subunit P signature 212 231 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy11g1257 312 PRINTS Clp protease catalytic subunit P signature 152 172 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy11g1257 312 PRINTS Clp protease catalytic subunit P signature 191 208 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy11g1257 312 PRINTS Clp protease catalytic subunit P signature 112 127 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy11g1257 312 PRINTS Clp protease catalytic subunit P signature 269 288 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy11g1257 312 Pfam Clp protease 112 292 IPR023562 -
Ahy11g1257 312 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 28 311 - -
Ahy11g1257 312 Coils Coil 237 257 - -
Ahy11g1257 312 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 28 311 IPR023562 -
Ahy11g1257 312 CDD S14_ClpP_2 112 290 IPR001907 GO:0004176|GO:0004252|GO:0006508
Ahy11g1257 312 Gene3D - 86 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1257 Ahy-Chr11 41788194 41794744 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1257 K01358 - gmx:100780029 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1257 11 41788194 41794744 Ahy11g1257 11 41788194 41794744 ECH
Ahy11g1257 11 41788194 41794744 Ahy1g1245 1 34866910 34875447 hybridization