Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1207 ATGTTGTCAACTTCAACTCCAAACCTGAGTTCCCCTCCTTTTTTTATTTTCTTTATAAATATGCACATTCCGTCTTTAGAAATTCTACGTACCGTTCCTTTCTTCCATCTTCTCACAAAAATGGCCTTAACACTTCGTTCTTCAATCTCTTTTGTAAACCAGAAAGAAACCAAGGCCCTTAAAGCTTTTGATGATGTCTCTGCCACAGTTAGCTTTGCAAAGATTAAGCCATCTTCCCGCATTCAAGTAAAGAATTCGGCGAGGGAAGCAAGTCATCATCAGACACACCAGAGAGATGAGCAACGGGAGAAGGTGCATGCGCCGTCAGTTGCTCATCACGACAACCACAATGTGTCAAAGAGGGTGCCTGTGTATGTGATGCTGCCGCTAGACACAGTAACAATGGGAGGCGGCTTGAACAAGCCGAGAGCAATGAATGCGAGTTTGATGGCGCTGAAAAGTGCCGGCGTTGAAGGGGTAATGGTTGATGTATGGTGGGGTTTGGCCGAGAAAGATGGGCCTCTGAAGTACAACTGGGAAGCCTACGCTGAGCTTGTGCAGATGGTACAAATGCATGGCTTGAAGCTTCAAGTTGTCATGTCTTTCCATCAGTGTGGAGGAAATGTTGGAGACACTTGCAGCATTCCTCTACCACCTTGGGTGTTGGAAGAGATCAGCAAGAACCCTGACCTGGTTTATACAGACAGATCAGGGAGGAGGAATCCTGAGTACATCTCTTTAGGGTGTGATTCCACGCCTGTGCTGAAAGGAAGGACTCCCCTCCAAGTTTACTCTGACTACATGAAGAGCTTCCATGACAGATTCAGAAATTACTTGGGCAGTGTTATCGTGGAAATACAAGTAGGTATGGGTCCTTGTGGGGAGCTAAGATATCCATCATACCCAGAAAGCAATGGAACTTGGAGGTTTCCTGGAATTGGTGAATTCCAATGCTACGACAAGTATATGAAAGCATCCTTGGCAGCAGCTGCAGAAGCCATTGGAAAGAAAGAATGGGGAACAAGTGGTCCCCATGACTCTGGCAAGTACAACCAATTTCCAGAAGATACTGGATTTTTTAAAAGGGAAGGAACATGGAACTCCGAATATGGACAGTTCTTTCTGGAATGGTACTCCAGCAAGTTGCTGGATCATGGTGACAAGATTCTTGCATCTGCCAAAGGAATATTTCAGGCATCTGGGGTCAAACTATCTGGGAAAATTGCTGGAATCCATTGGCACTACAAAGCAAGGTCACATGCAGCTGAACTAACCGCCGGATATTATAATACACGATTCAATGATGGTTATCTACCAATTGCTAGAATGCTGGCAAAACATGAAGTTATCTTCAATTTCACCTGCATGGAAATGAAGGACAGAGAGCAGCCAGGCCATGCTAACTGCTCACCAGAGGGGTTAGTTCATCAGGTAAAGATGGCAACCAAGATGGCTAGAGTAGAACTTGCAGGCGAAAATGCCTTGGAAAGATATGATGCAGATGCATATGCTCAAGTTTTGTCAACAAGTAGGTCAGACTCCGGCAATGGACTAACCGCATTTACATATCTAAGAATGAACAAGAAGTTGTTTGAAGGTGATAACTGGCGGCACATGGTGGACTTTGTCAGAAGCATGTCTGAAGGTGGTCGGAGACAGAGACTCTCAGATGCTGATTCCCGAGGAAGTGACCTTTATGTTGGGCACATCAAGGGAACTCAGAGGGAAAAATCACAAGAGGCTGCTCTTGTGTGA 1755 0.453 MLSTSTPNLSSPPFFIFFINMHIPSLEILRTVPFFHLLTKMALTLRSSISFVNQKETKALKAFDDVSATVSFAKIKPSSRIQVKNSAREASHHQTHQRDEQREKVHAPSVAHHDNHNVSKRVPVYVMLPLDTVTMGGGLNKPRAMNASLMALKSAGVEGVMVDVWWGLAEKDGPLKYNWEAYAELVQMVQMHGLKLQVVMSFHQCGGNVGDTCSIPLPPWVLEEISKNPDLVYTDRSGRRNPEYISLGCDSTPVLKGRTPLQVYSDYMKSFHDRFRNYLGSVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLAAAAEAIGKKEWGTSGPHDSGKYNQFPEDTGFFKREGTWNSEYGQFFLEWYSSKLLDHGDKILASAKGIFQASGVKLSGKIAGIHWHYKARSHAAELTAGYYNTRFNDGYLPIARMLAKHEVIFNFTCMEMKDREQPGHANCSPEGLVHQVKMATKMARVELAGENALERYDADAYAQVLSTSRSDSGNGLTAFTYLRMNKKLFEGDNWRHMVDFVRSMSEGGRRQRLSDADSRGSDLYVGHIKGTQREKSQEAALV* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1207 584 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 402 418 IPR001554 GO:0000272|GO:0016161
Ahy1g1207 584 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 437 460 IPR001554 GO:0000272|GO:0016161
Ahy1g1207 584 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 366 385 IPR001554 GO:0000272|GO:0016161
Ahy1g1207 584 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 419 430 IPR001554 GO:0000272|GO:0016161
Ahy1g1207 584 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 177 195 IPR001554 GO:0000272|GO:0016161
Ahy1g1207 584 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 199 220 IPR001554 GO:0000272|GO:0016161
Ahy1g1207 584 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 474 496 IPR001554 GO:0000272|GO:0016161
Ahy1g1207 584 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 291 313 IPR001554 GO:0000272|GO:0016161
Ahy1g1207 584 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 156 170 IPR001554 GO:0000272|GO:0016161
Ahy1g1207 584 ProSitePatterns Beta-amylase active site 1. 203 211 IPR018238 GO:0000272|GO:0016161
Ahy1g1207 584 Pfam Glycosyl hydrolase family 14 125 542 IPR001554 GO:0000272|GO:0016161
Ahy1g1207 584 MobiDBLite consensus disorder prediction 86 113 - -
Ahy1g1207 584 PANTHER - 41 584 IPR001554 GO:0000272|GO:0016161
Ahy1g1207 584 SUPERFAMILY (Trans)glycosidases 118 549 IPR017853 -
Ahy1g1207 584 MobiDBLite consensus disorder prediction 81 113 - -
Ahy1g1207 584 Gene3D Glycosidases 111 580 - -
Ahy1g1207 584 PRINTS Plant beta-amylase signature 281 290 IPR001371 GO:0000272|GO:0016161
Ahy1g1207 584 PRINTS Plant beta-amylase signature 440 450 IPR001371 GO:0000272|GO:0016161
Ahy1g1207 584 PRINTS Plant beta-amylase signature 522 536 IPR001371 GO:0000272|GO:0016161
Ahy1g1207 584 PANTHER BETA-AMYLASE 41 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1207 Ahy-Chr1 32449155 32452472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1207 41 584 Glycoside Hydrolase AT4G17090 71.325 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1207 K01177 - gmx:100818063 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1214 11 38824711 38827967 Ahy1g1207 1 32449155 32452472 hybridization