Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1214 ATGCACATTCCATCTTTAGAAATTCTACGTACCCTTCCTTTCTTCCATCTTCGCACAAAAATGGCCTTAACACTTCGTTCTTCAATCTCTTTTGTAAACCAGAAAGAAACCAAGGCCCTTAAAGCTTTTGATGATGTCTCTGCCACAGTTAGCTTTGCAAAGATTAAGCCATCTTCCCGCATTCAAGTAAAGAATTCGGCGAGGGAAGCAAGTCATCATCAGACACACCAGAGAGATGAGCAACGGGAGAAGGTGCATGCGCCGTCAGTTGCTCATCACGACAACCACAATGTGTCAAAGAGGGTGCCTGTGTATGTGATGCTGCCGCTAGACACAGTAACAATGGGAGGCGGCTTGAACAAGCCGAGAGCAATGAATGCAAGTTTGATGGCTCTGAAAAGTGCCGGCGTTGAAGGGGTAATGGTTGATGTATGGTGGGGTTTGGCGGAGAAAGATGGACCTCTGAAGTACAACTGGGAAGCCTACGCTGAGCTTGTGCAGATGGTACAAATGCATGGCTTGAAGCTTCAAGTTGTCATGTCTTTCCATCAGTGTGGAGGAAATGTTGGAGACACTTGCAGCATTCCTCTACCACCATGGGTGTTGGAAGAGATCAGCAAGAACCCTGACCTGGTTTATACAGACAGATCAGGGAGGAGGAATCCTGAGTACATCTCTTTAGGGTGTGATTCCATGCCTGTGCTGAAAGGAAGGACTCCCCTCCAAGTTTACTCTGACTACATGAAGAGCTTCCATGACAGATTCAGAAATTACTTGGGCAGTGTTATCGTGGAAATACAAGTAGGTATGGGTCCTTGTGGGGAGCTAAGATATCCATCATACCCAGAAAGCAATGGAACTTGGAGGTTTCCTGGAATTGGTGAATTCCAATGCTACGACAAGTATATGAAAGCATCCTTGGCAGCAGCTGCAGAAGCCATTGGAAAGAAAGAATGGGGAACAAGTGGTCCCCATGACTCTGGCAAGTACAACCAATTTCCAGACGATACTGGATTTTTTAAAAGGGAAGGAACATGGAACTCCGAATATGGACAGTTCTTTCTGGAATGGTACTCCAGCAAGTTGCTGGATCATGGTGACAAGATTCTTGCATCTGCCAGAGGAATATTTCAGGCATCTGGGGTCAAACTATCTGGGAAAATTGCTGGAATCCATTGGCACTACAAAGCAAGGTCACATGCAGCTGAACTAACCGCCGGATATTATAATACACGATTCAATGATGGTTATCTACCAATTGCTAGAATGCTGGCAAAACATGAAGTTATCTTCAATTTCACCTGCATGGAAATGAAGGACAGAGAGCAGCCTGGCCACGCTAACTGCTCACCAGAGGGGTTAGTACATCAGGTAAAGATGGCAACCAAGATGGCTAGAGTAGAACTTGCAGGCGAAAATGCCTTGGAAAGATATGATGCAGATGCATATGCTCAAGTTTTGTCAACAAGTAGGTCAGACTCCGGCAACGGACTAACCGCATTTACATATCTAAGAATGAACAAGAAGTTGTTTGAAGGTGATAACTGGCGGCACATGGTGGACTTTGTCAGAAGCATGTCTGAAGGTGGTAGGAGACAGAGACTCTCAGACGCTGATTCCCGTGGAAGTGACCTTTATGTTGGGCACATCAAGGGAACTCAGAGGGAAAAATCACAAGAGGCTGCTCTTGTGTGA 1695 0.4578 MHIPSLEILRTLPFFHLRTKMALTLRSSISFVNQKETKALKAFDDVSATVSFAKIKPSSRIQVKNSAREASHHQTHQRDEQREKVHAPSVAHHDNHNVSKRVPVYVMLPLDTVTMGGGLNKPRAMNASLMALKSAGVEGVMVDVWWGLAEKDGPLKYNWEAYAELVQMVQMHGLKLQVVMSFHQCGGNVGDTCSIPLPPWVLEEISKNPDLVYTDRSGRRNPEYISLGCDSMPVLKGRTPLQVYSDYMKSFHDRFRNYLGSVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLAAAAEAIGKKEWGTSGPHDSGKYNQFPDDTGFFKREGTWNSEYGQFFLEWYSSKLLDHGDKILASARGIFQASGVKLSGKIAGIHWHYKARSHAAELTAGYYNTRFNDGYLPIARMLAKHEVIFNFTCMEMKDREQPGHANCSPEGLVHQVKMATKMARVELAGENALERYDADAYAQVLSTSRSDSGNGLTAFTYLRMNKKLFEGDNWRHMVDFVRSMSEGGRRQRLSDADSRGSDLYVGHIKGTQREKSQEAALV* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1214 564 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 399 410 IPR001554 GO:0000272|GO:0016161
Ahy11g1214 564 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 157 175 IPR001554 GO:0000272|GO:0016161
Ahy11g1214 564 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 271 293 IPR001554 GO:0000272|GO:0016161
Ahy11g1214 564 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 454 476 IPR001554 GO:0000272|GO:0016161
Ahy11g1214 564 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 346 365 IPR001554 GO:0000272|GO:0016161
Ahy11g1214 564 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 136 150 IPR001554 GO:0000272|GO:0016161
Ahy11g1214 564 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 417 440 IPR001554 GO:0000272|GO:0016161
Ahy11g1214 564 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 179 200 IPR001554 GO:0000272|GO:0016161
Ahy11g1214 564 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 382 398 IPR001554 GO:0000272|GO:0016161
Ahy11g1214 564 PANTHER BETA-AMYLASE 21 564 - -
Ahy11g1214 564 Pfam Glycosyl hydrolase family 14 105 522 IPR001554 GO:0000272|GO:0016161
Ahy11g1214 564 PRINTS Plant beta-amylase signature 261 270 IPR001371 GO:0000272|GO:0016161
Ahy11g1214 564 PRINTS Plant beta-amylase signature 502 516 IPR001371 GO:0000272|GO:0016161
Ahy11g1214 564 PRINTS Plant beta-amylase signature 420 430 IPR001371 GO:0000272|GO:0016161
Ahy11g1214 564 MobiDBLite consensus disorder prediction 66 93 - -
Ahy11g1214 564 MobiDBLite consensus disorder prediction 61 93 - -
Ahy11g1214 564 Gene3D Glycosidases 91 560 - -
Ahy11g1214 564 ProSitePatterns Beta-amylase active site 1. 183 191 IPR018238 GO:0000272|GO:0016161
Ahy11g1214 564 PANTHER - 21 564 IPR001554 GO:0000272|GO:0016161
Ahy11g1214 564 SUPERFAMILY (Trans)glycosidases 98 529 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1214 Ahy-Chr11 38824711 38827967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1214 21 564 Glycoside Hydrolase AT4G17090 70.962 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1214 K01177 - gmx:100818063 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1214 11 38824711 38827967 Ahy11g1214 11 38824711 38827967 ECH
Ahy11g1214 11 38824711 38827967 Ahy1g1207 1 32449155 32452472 hybridization