Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1175 ATGAAATCAAAGAGAGGAAAACGCTCAGAGGCCTTTTGGCCTTCAATTGTGATGAAGAAATGGCTAAATATAAAGCCACAGGTATATGATTTTAGTGAAGATGAAGTAGACACTGAAACTGAAACTGAAACTGAAACTGAGAGTGAAGATGATGCTTGCTCTCTTAAAAATTCAAGACATCGTCTGCGTCATCATCATGAAGAAGATAATCCACTTAGAAGAACACAATCCAGATTCCCAACTCAAACAGTACCAGATGCATCTTGTAAGGGATACAAGCCGAAACATCGAAGAGGAAAATCTGAAACGTTGCGTGCACAATACATAAACACAAAGGAAGTGAGGATAACAGTTGGAACTTGGAATGTTGCTGGAAGACTTCCATCTAAGGATCTTGAGATTGAAGACTGGCTTTGTAGTGAAGAACCAGCAGATATCTACATCATTGGTTTCCAAGAGGTAGTTCCGTTAAATGCCGGAAATGTACTGGGAGCAGAGGACAATACACCGATCCGGAAATGGGAAGCAATCATTAGAAGAACTCTGAACAAAACTTCTGAATGTGAAAGTGAAGACAAAAGCCTCAGTGGCCCTCATTCTCCTGTACTAAGAACCTGTTCTGCTCCTGATGTTCTAGCAGACAGTATAGACACTAATCCATTAGATATGATGGACGAAGCGTACGGCAGAGCTTTCGATAATGATGATCTAGAACATGAGGAAGTGAACAACATACTCGGTATAGGGAAGAACTTACAGTTGAGAAGAGTATATGGTGTTGATATTAAGACTACGTTAGATTGGCCAGAACGTCCACTAGATGCAACTCCCATTGTTGATTCTGGCCCCAAGTTGCGAAGAGTACTAAGCAGCTCCGAATTGAACTGGAGGGGTAATGCTTTGGTGTATGGTGGTGGGATGACACGGTCACACCATAGTTCTGGAAACTTGAATTTGTTCTGGAAAGAGCAGAAGGTGGTGCCTGAAGAAGTAGTAACTGATCCCATTGCACATGTGTCTGACATGTTATCTGATGAGGAAGATGATACTTTTTCTGAATTGCCAAATGACAAGGATGATAATGGGCTAGGCACCATGAAATCGCATCCTGCTTATGTTCGAATCGTTAGCAAGCAGATGGTGGGGATCTATGTATCTGTCTGGGTGCAAAGGAAGTTAAGAAGACACATTAATAACTTGAAAGTTTCTCCGGTTGGAGTTGGTCTTATGGGCTACATGGGAAACAAGGGATCTGTTTCAGTTAGTATGTCTCTCTTTCATTCGCGCCTATGTTTTGTTTGTTCCCATCTGACTTCAGGTCAGAAAGATGGGGCTGAGCAAAGACGAAATGCAGATGTTAATGAAATTCTGCGACGCACATGCTTCTCGTCTGTCCTTGATTCAGATCAACCCCAGACAATCCCATCTCATGATCAGATGTTCTGGTTTGGGGACCTAAATTATCGTATCAACATGTTAGATGCCGAGGTTCGAAAGCTAGTAGCTCTGAAGAAATGGGATGAATTGATGAATTATGATCAGCTAAGCAATGAGTTACATAGTGGACATGTATTTGAAGGATGGAAAGAAGGACTGATAAATTTCCCACCAACTTACAAGTATGAATTCAATTCTGATAAATATGTTGGAGAGAACCCAAAAGAAGGGGAAAAGAAGAGATCTCCAGCATGGTGTGATCGTATATTGTGGCAAGGAAAAGGAATAAGGCAACTTGAATATAGGCGTGCAGAAAATAAGCTTTCAGATCATAGACCTGTTAGTTCAATCTTCTCTGTCGATGTTGAAGTCTTTGACCAACGCAAGCTACAACGAGCTCTGAATTTCACATGTGCTGTAGTCCACCCAGAGGTTTTTCTTCCAAATGATGATGGCTTGCAATTTTACTAG 1908 0.414 MKSKRGKRSEAFWPSIVMKKWLNIKPQVYDFSEDEVDTETETETETESEDDACSLKNSRHRLRHHHEEDNPLRRTQSRFPTQTVPDASCKGYKPKHRRGKSETLRAQYINTKEVRITVGTWNVAGRLPSKDLEIEDWLCSEEPADIYIIGFQEVVPLNAGNVLGAEDNTPIRKWEAIIRRTLNKTSECESEDKSLSGPHSPVLRTCSAPDVLADSIDTNPLDMMDEAYGRAFDNDDLEHEEVNNILGIGKNLQLRRVYGVDIKTTLDWPERPLDATPIVDSGPKLRRVLSSSELNWRGNALVYGGGMTRSHHSSGNLNLFWKEQKVVPEEVVTDPIAHVSDMLSDEEDDTFSELPNDKDDNGLGTMKSHPAYVRIVSKQMVGIYVSVWVQRKLRRHINNLKVSPVGVGLMGYMGNKGSVSVSMSLFHSRLCFVCSHLTSGQKDGAEQRRNADVNEILRRTCFSSVLDSDQPQTIPSHDQMFWFGDLNYRINMLDAEVRKLVALKKWDELMNYDQLSNELHSGHVFEGWKEGLINFPPTYKYEFNSDKYVGENPKEGEKKRSPAWCDRILWQGKGIRQLEYRRAENKLSDHRPVSSIFSVDVEVFDQRKLQRALNFTCAVVHPEVFLPNDDGLQFY* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1175 635 MobiDBLite consensus disorder prediction 49 74 - -
Ahy1g1175 635 MobiDBLite consensus disorder prediction 32 75 - -
Ahy1g1175 635 Gene3D Endonuclease/exonuclease/phosphatase 95 201 IPR036691 -
Ahy1g1175 635 MobiDBLite consensus disorder prediction 33 48 - -
Ahy1g1175 635 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 627 - -
Ahy1g1175 635 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 627 IPR045849 GO:0004445|GO:0046855
Ahy1g1175 635 SUPERFAMILY DNase I-like 104 618 IPR036691 -
Ahy1g1175 635 SMART i5p_5 306 605 IPR000300 GO:0016791|GO:0046856
Ahy1g1175 635 Gene3D Endonuclease/exonuclease/phosphatase 336 622 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1175 Ahy-Chr1 30277265 30283709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1175 365 606 Acyl Lipid Metabolism Gene Families AT1G65580 30.903 9.60e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1175 K24221 - gmx:100807214 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1180 11 36004054 36011127 Ahy1g1175 1 30277265 30283709 hybridization
Ahy5g0471 5 5659224 5662666 Ahy1g1175 1 30277265 30283709 PCT
Ahy1g1175 1 30277265 30283709 Ahy5g0471 5 5659224 5662666 PCT