Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1180 ATGAAATCAAAGAGAGGAAAACGCTCAGAGGCCTTTTGGCCTTCAATTGTGATGAAGAAATGGCTAAATATAAAGCCACAGGTATATGATTTTAGTGAAGATGAAGTAGACACTGAAACTGAAACTGAAACTGAGAGTGAAGATGATGCTTGCTCTCTTAAAAATTCAAGACATCGTCTGCATCATCATCATGAAGAAGATAATCCACTTAGAAGAACACAATCCAGATTCCCAAGTCAAACGGTACCAGATGCATCTTGTAAGGGATACAAGCCGAAACATCGAAGAGGAAAATCTGAAACGTTGCGTGCACAATACATAAACACAAAGGAAGTGAGGATAACAGTTGGAACTTGGAATGTTGCTGGAAGACTTCCATCTAAGGATCTTGAGATTGAAGACTGGCTTTGTACTGAAGAACCAGCAGATATCTACATCATTGGTTTCCAAGAGGTAGTTCCGTTAAATGCCGGAAATGTACTGGGAGCAGAGGACAATACACCGATCCGGAAATGGGAAGCAATCATTAGAAGAACTCTGAACAAAACTTCTGAATGTGAAAGTGAAGACAAAAGCCTCAGTGGCCCTCATTCTCCTGTACTAAGAACCTCTTCTGCTCCTGATGTTCTAGCAGACAGTATAGACACTAATCCATTAGATATGATGGACGAAGCGTACGGCAGAGCTTTCGATAATGATTATCTAGAACATGAGGAAGTGAACAACATACTCGGTATAGGGAAGAACTTACAGTTGAGAAGAGTATATGGTGTTGATATTAAGACTACGTTAGATTGGCCAGAACGTCCACTAGATGCAACTCCCATTGTTGATTCTGGCCCCAAGTTGCGAAGAGTACTAAGCAGCTCCGAATTGAACTGGAGGGGTAATGCTTTGGTGTATGGTGGTGGGATGACACGGTCACACCATAGTTCTGGAAACTTGAATTTGTTCTGGAAAGAGCAGAAGGTGGTGCCTGAAGAAGTAGTAACTGATCCTATTTCACATGTGTCTGACATGTTATCTGATGAGGAAGATGATACTTTTTCTGAATTGCCAAATGACAAGGATGATAATGGGCTAGGCACCATGAAATCGCATCCTGCTTATGTTCGAATTGTTAGCAAGCAAATGGTGGGGATCTATGTATCTGTCTGGGTGCAAAGGAAGTTAAGAAGACACATTAATAACTTGAAAGTTTCTCCGGTTGGAGTTGGTCTTATGGGCTACATGGGAAACAAGGGATCTGTTTCAGTTAGTATGTCTCTCTTTCATTCGCGCCTATGTTTTGTTTGTTCCCATCTGACTTCAGGTCAGAAAGATGGGGCTGAGCAAAGACGAAATGCAGATGTTAATGAAATTCTGCGACGCACATGCTTCTCGTCTGTCCTTGATTCAGATCAACCCCAGACAATCCCATCTCATGATCAGATGTTCTGGTTTGGGGACCTAAATTATCGTATCAACATGTTAGATGCCGAGGTTCGAAAGCTAGTAGATCTGAAGAAATGGGATGAATTGATGAATTATGATCAGCTAAGCAATGAGTTACATAGTGGACATGTATTTGAAGGATGGAAAGAAGGACTGATAAATTTCCCACCAACTTACAAGTATGAATTCAATTCTGATAAATATGTTGGAGAGAACCCAAAAGAAGGGGAAAAGAAGAGATCTCCAGCATGGTGTGATCGTATATTGTGGCAAGGAAAAGGAATAAGGCAACTTGAATATAGGCGTGCGGAAAATAAGCTTTCAGATCATAGACCTGTTAGTTCAATCTTCTCTGTCGATGTTGAAGTCTTCGACGAACGCAAGCTACAACGAGCTCTAAATTTCACATGTGCTGTAGTCCACCCAGAGGTTTTTCTTCCAAATGATGATGGCTTGCAATTTTACTAG 1902 0.4117 MKSKRGKRSEAFWPSIVMKKWLNIKPQVYDFSEDEVDTETETETESEDDACSLKNSRHRLHHHHEEDNPLRRTQSRFPSQTVPDASCKGYKPKHRRGKSETLRAQYINTKEVRITVGTWNVAGRLPSKDLEIEDWLCTEEPADIYIIGFQEVVPLNAGNVLGAEDNTPIRKWEAIIRRTLNKTSECESEDKSLSGPHSPVLRTSSAPDVLADSIDTNPLDMMDEAYGRAFDNDYLEHEEVNNILGIGKNLQLRRVYGVDIKTTLDWPERPLDATPIVDSGPKLRRVLSSSELNWRGNALVYGGGMTRSHHSSGNLNLFWKEQKVVPEEVVTDPISHVSDMLSDEEDDTFSELPNDKDDNGLGTMKSHPAYVRIVSKQMVGIYVSVWVQRKLRRHINNLKVSPVGVGLMGYMGNKGSVSVSMSLFHSRLCFVCSHLTSGQKDGAEQRRNADVNEILRRTCFSSVLDSDQPQTIPSHDQMFWFGDLNYRINMLDAEVRKLVDLKKWDELMNYDQLSNELHSGHVFEGWKEGLINFPPTYKYEFNSDKYVGENPKEGEKKRSPAWCDRILWQGKGIRQLEYRRAENKLSDHRPVSSIFSVDVEVFDERKLQRALNFTCAVVHPEVFLPNDDGLQFY* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1180 633 MobiDBLite consensus disorder prediction 47 72 - -
Ahy11g1180 633 SUPERFAMILY DNase I-like 102 616 IPR036691 -
Ahy11g1180 633 SMART i5p_5 304 603 IPR000300 GO:0016791|GO:0046856
Ahy11g1180 633 Gene3D Endonuclease/exonuclease/phosphatase 333 620 IPR036691 -
Ahy11g1180 633 MobiDBLite consensus disorder prediction 185 214 - -
Ahy11g1180 633 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 625 - -
Ahy11g1180 633 MobiDBLite consensus disorder prediction 32 94 - -
Ahy11g1180 633 Gene3D Endonuclease/exonuclease/phosphatase 93 201 IPR036691 -
Ahy11g1180 633 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 625 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1180 Ahy-Chr11 36004054 36011127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1180 363 604 Acyl Lipid Metabolism Gene Families AT1G65580 31.250 5.14e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1180 K24221 - gmx:100807214 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1180 11 36004054 36011127 Ahy1g1175 1 30277265 30283709 hybridization
Ahy5g0471 5 5659224 5662666 Ahy11g1180 11 36004054 36011127 PCT
Ahy11g1180 11 36004054 36011127 Ahy5g0471 5 5659224 5662666 PCT