Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3551 ATGACAGAAGAGGAGCAACCCAATAAGGTGGACGAGGAGAAATCTGTAATTCCACAACTACCTCCTACAGATAACAAGCATGATGATGAATCCAAAGCTCTTGCCATAGTTGAGAAGACTGAGGAAGGTGCTGAAGAGAAACCCTCTGAGGGATCTATCAACAGAGATGCTGTGCTTGCAAGAGTTGCAACAGAGAAGAGGATGTCATTGATCAAAGCCTGGGAAGAAAGTGAGAAATCAAGAGCAGAGAACAAAACTCAGAAGAAGCTTTCATGCATTTCATCATGGGAGAAGAGTAAAATAGCTTCCACGGAGGCTGAACTGAAAAAGATTCATCAACAACTGGAGAAGAAAAAGGCAGAACATGCAGAGAAATTGAGAAACAAGATAGCAGCAATTCACAGGGAAGCTGAAGAGAAGAGGGCATTCACTGAGGCCAAGAAAGGGGAAGATATCCTCAAGGCAGAGGAGACAGCTGCAAAGTATAGAGCAACTGAAACAGCTCCAAAGAAAATCTTTGGTTGTTTCTAA 531 0.4294 MTEEEQPNKVDEEKSVIPQLPPTDNKHDDESKALAIVEKTEEGAEEKPSEGSINRDAVLARVATEKRMSLIKAWEESEKSRAENKTQKKLSCISSWEKSKIASTEAELKKIHQQLEKKKAEHAEKLRNKIAAIHREAEEKRAFTEAKKGEDILKAEETAAKYRATETAPKKIFGCF* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3551 176 MobiDBLite consensus disorder prediction 1 56 - -
Ahy19g3551 176 MobiDBLite consensus disorder prediction 23 52 - -
Ahy19g3551 176 Pfam Remorin, N-terminal region 9 62 IPR005518 -
Ahy19g3551 176 PANTHER REMORIN 1.4 4 176 - -
Ahy19g3551 176 PANTHER OS02G0117200 PROTEIN 4 176 - -
Ahy19g3551 176 Pfam Remorin, C-terminal region 66 171 IPR005516 -
Ahy19g3551 176 Coils Coil 101 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3551 Ahy-Chr19 158202271 158203610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3551 - - gmx:100499700 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3514 15 157885744 157888089 Ahy19g3551 19 158202271 158203610 ECH
Ahy15g1024 15 15650612 15653102 Ahy19g3551 19 158202271 158203610 ECH
Ahy13g2872 13 115030852 115032131 Ahy19g3551 19 158202271 158203610 ECH
Ahy19g3551 19 158202271 158203610 Ahy19g3551 19 158202271 158203610 ECH
Ahy19g3551 19 158202271 158203610 Ahy9g2075 9 109458465 109459799 hybridization