Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2872 ATGTTCATGGGAGAGACCTCTGACAATAACTCAAACTCATCGGACTCCGAGGATGTTCCTCACTACTCTTATACCGAAAACAATAAACTCCTCAAATATCAAGAGGCTGCAACTTCTTCTGCCAGAAAGGATACAGGGGATTTAGATGGTCCGCTTGCAAGACTTGAAGCAGAGAAGAAACGGGCTTTGATTAAAGCATGGGAAGAAAGTGAGAAGACTAAAATAGACAACAGGGCTTATAAGATGCAATTTGCTGTTGGATTATGGGAGGATAGCAAGAAAGCATCGGTTGAGGCAAAGCTTAAGAAAAATGCGGAAAAATTGGAGAGAAAGAAGGCTGAGTATTTCGAAAAGATGCAAAATAAAATTGCCGAAATTCATCGGATGGCAGAGGAAAAAAGAGCAGGAATTGAAGCTCAAAGAGGGAAAGGATTGCTCAAGATAGAGGACACTGCTGAAAATTTTCGCACACGTGGCTATTCCCCAAAGAAAATTCTTTCATGCTTTACTGCTTAA 516 0.4089 MFMGETSDNNSNSSDSEDVPHYSYTENNKLLKYQEAATSSARKDTGDLDGPLARLEAEKKRALIKAWEESEKTKIDNRAYKMQFAVGLWEDSKKASVEAKLKKNAEKLERKKAEYFEKMQNKIAEIHRMAEEKRAGIEAQRGKGLLKIEDTAENFRTRGYSPKKILSCFTA* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2872 171 Coils Coil 94 125 - -
Ahy13g2872 171 PANTHER CARBOXY-TERMINAL REGION REMORIN 31 170 - -
Ahy13g2872 171 Pfam Remorin, C-terminal region 59 164 IPR005516 -
Ahy13g2872 171 MobiDBLite consensus disorder prediction 1 25 - -
Ahy13g2872 171 PANTHER OS02G0117200 PROTEIN 31 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2872 Ahy-Chr13 115030852 115032131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2872 - - adu:107479967 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2872 13 115030852 115032131 Ahy13g2872 13 115030852 115032131 ECH
Ahy13g2872 13 115030852 115032131 Ahy15g3514 15 157885744 157888089 ECH
Ahy13g2872 13 115030852 115032131 Ahy19g3551 19 158202271 158203610 ECH