Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1361 ATGGATCCCAACCAGCCTGTAACTGAAAACTACGCCAATCCGAAGACATGCTTCTTTCACGTTCTCTTCAAGGCTGCAGCATTGGCATTTTACATACTCTCGGCCCTCTTTATTGATAACTTTGTCATCATTTTTGTGGTGACTGTCCTTCTTGCTGCCCTTGATTTCTGGGTAGTAAAAAATGTGAGTGGGCGGATTTTGGTTGGTTTGAGATGGTGGAATGAAATAAATGATCTGGGTGAGAGTGTTTGGAAATTTGAATGTCTTGACCAAGAGTCATTGGCTCGGATGAACAAGAAAGATTCGTGGCTTTTCTGGTGGACCCTTTATCTTACAGCAGTTGCATGGATTGTGTTGGGAATCTTCTCACTTATAAGGCTTCAAGCTGATTATCTCCTTGTCATAGGAGTTTGTGTGACTTTGAGCGTTGCAAATATTGTTGGTTTTACCAAATGCAAAAAAGATGCCAAGAAGCAGTTTCAACAATTTGCTTCTCAGACCCTTGCCTCTCGGTTCTCGTCTACATTATCGTCAGCATTCAGTGTTGTTTGA 552 0.4185 MDPNQPVTENYANPKTCFFHVLFKAAALAFYILSALFIDNFVIIFVVTVLLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFECLDQESLARMNKKDSWLFWWTLYLTAVAWIVLGIFSLIRLQADYLLVIGVCVTLSVANIVGFTKCKKDAKKQFQQFASQTLASRFSSTLSSAFSVV* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1361 183 Pfam Eukaryotic protein of unknown function (DUF846) 13 152 IPR008564 GO:0016021
Ahy19g1361 183 PANTHER UNCHARACTERIZED 1 183 IPR008564 GO:0016021
Ahy19g1361 183 PANTHER GOLGI APPARATUS MEMBRANE PROTEIN TVP23 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1361 Ahy-Chr19 29551195 29554210 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1361 - - gmx:100499702 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1361 19 29551195 29554210 Ahy19g1361 19 29551195 29554210 ECH
Ahy19g1361 19 29551195 29554210 Ahy9g1083 9 23160955 23163919 hybridization
Ahy16g0872 16 15664305 15666237 Ahy19g1361 19 29551195 29554210 PCT
Ahy6g0487 6 5929955 5931877 Ahy19g1361 19 29551195 29554210 PCT
Ahy19g1361 19 29551195 29554210 Ahy16g0872 16 15664305 15666237 PCT
Ahy19g1361 19 29551195 29554210 Ahy6g0487 6 5929955 5931877 PCT